RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PDE6DO43924 150 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 TFPI2P48307 235 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 CMC4P56277 68 aaPredicted RBP9.97□□□□□ -0.81
TRAIP-210ENST00000489948 CD81P60033 236 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 GUCA2BQ16661 112 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 HAGHQ16775 308 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 ODF3L2Q3SX64 289 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 SAMD5Q5TGI4 173 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 CST9LP1Q5W188 147 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 EIF4E3Q8N5X7 224 aaKnown RBP9.97□□□□□ -0.81
TRAIP-210ENST00000489948 HIST1H2BAQ96A08 127 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 C11orf52Q96A22 123 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 C20orf173Q96LM9 149 aa9.97□□□□□ -0.81
TRAIP-210ENST00000489948 PGPA6NDG6 321 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 F6UZH7 168 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 TMEM250H0YL14 139 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 M0R3E3 92 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 ZNF688P0C7X2 276 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 CSN1S1P47710 185 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 SUMO1P63165 101 aaKnown RBP9.96□□□□□ -0.82
TRAIP-210ENST00000489948 WFDC3Q8IUB2 231 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 RNF182Q8N6D2 247 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 CMTM2Q8TAZ6 248 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 ATG101Q9BSB4 218 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 EPDR1Q9UM22 224 aa9.96□□□□□ -0.82
TRAIP-210ENST00000489948 RBAKDNA6NC62 111 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 TCRAP04437 139 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 SLC25A5P05141 298 aaKnown RBP9.95□□□□□ -0.82
TRAIP-210ENST00000489948 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 PSMG4Q5JS54 123 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 IGFL4Q6B9Z1 124 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 UQCC3Q6UW78 93 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 RPUSD4Q96CM3 377 aaKnown RBP9.95□□□□□ -0.82
TRAIP-210ENST00000489948 RARRES2Q99969 163 aa9.95□□□□□ -0.82
TRAIP-210ENST00000489948 EIF5A2Q9GZV4 153 aaKnown RBP9.95□□□□□ -0.82
TRAIP-210ENST00000489948 NOTCH1P46531 2555 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 FBLL1A6NHQ2 334 aaKnown RBP9.94□□□□□ -0.82
TRAIP-210ENST00000489948 OR11H12B2RN74 326 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 PEX7O00628 323 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 PEA15Q15121 130 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 COMMD7Q86VX2 200 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 CYB561D1Q8N8Q1 229 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 ZNF738Q8NE65 137 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 C2CD4CQ8TF44 421 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
TRAIP-210ENST00000489948 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 A8MTW9 85 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 DEFB131AP59861 70 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 KPRPQ5T749 579 aaPredicted RBP9.93□□□□□ -0.82
TRAIP-210ENST00000489948 GTSCR1Q86UQ5 136 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 TMEM75Q8N9X5 138 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 LINC00052Q96N35 136 aa9.93□□□□□ -0.82
TRAIP-210ENST00000489948 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
TRAIP-210ENST00000489948 A0A0J9YX75 114 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 TRBV6-1A0A0K0K1D8 114 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 ZNF705FA8MVS1 300 aaPredicted RBP9.92□□□□□ -0.82
TRAIP-210ENST00000489948 PRAC2D3DTV9 90 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 NPIPB6E9PJ23 425 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 G3V4G9 280 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 K7EQM0 130 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 CD7P09564 240 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 HLA-DRB4P13762 266 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 GNG5P63218 68 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 CLUHP3Q96NS8 147 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 KLF12Q9Y4X4 402 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 HLA-DRB4X5D2U9 266 aa9.92□□□□□ -0.82
TRAIP-210ENST00000489948 S100A9P06702 114 aaKnown RBP9.91□□□□□ -0.82
TRAIP-210ENST00000489948 SRP19P09132 144 aaKnown RBP9.91□□□□□ -0.82
TRAIP-210ENST00000489948 SRSF3P84103 164 aaKnown RBP9.91□□□□□ -0.82
TRAIP-210ENST00000489948 GOLT1AQ6ZVE7 132 aa9.91□□□□□ -0.82
TRAIP-210ENST00000489948 OR10J6PQ8NGY7 276 aa9.91□□□□□ -0.82
TRAIP-210ENST00000489948 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
TRAIP-210ENST00000489948 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
TRAIP-210ENST00000489948 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
TRAIP-210ENST00000489948 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
TRAIP-210ENST00000489948 TRBV7-9A0A0J9YWB2 115 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 C9JQL5 133 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 DUSP14O95147 198 aaKnown RBP9.9□□□□□ -0.82
TRAIP-210ENST00000489948 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
TRAIP-210ENST00000489948 AKR1C3P42330 323 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 CNN1P51911 297 aaKnown RBP9.9□□□□□ -0.82
TRAIP-210ENST00000489948 KRTAP10-11P60412 298 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 TMEM183BQ1AE95 376 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 EBLN2Q6P2I7 272 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 RPH3ALQ9UNE2 315 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
TRAIP-210ENST00000489948 IGLV2-11P01706 119 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 RPL35P42766 123 aaKnown RBP9.89□□□□□ -0.83
TRAIP-210ENST00000489948 TAS2R60P59551 318 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 GDF5OSQ5U4N7 250 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 Q86TA4 180 aa9.89□□□□□ -0.83
TRAIP-210ENST00000489948 Q8N1Y9 231 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms