RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 RNF182Q8N6D2 247 aa13.64□□□□□ -0.23
C9orf16-203ENST00000489240 HLA-DMBP28068 263 aa13.63□□□□□ -0.23
C9orf16-203ENST00000489240 CD81P60033 236 aa13.63□□□□□ -0.23
C9orf16-203ENST00000489240 UQCC3Q6UW78 93 aa13.63□□□□□ -0.23
C9orf16-203ENST00000489240 ZNF738Q8NE65 137 aa13.63□□□□□ -0.23
C9orf16-203ENST00000489240 LINC00052Q96N35 136 aa13.63□□□□□ -0.23
C9orf16-203ENST00000489240 EPDR1Q9UM22 224 aa13.63□□□□□ -0.23
C9orf16-203ENST00000489240 ZNF256Q9Y2P7 627 aaPredicted RBP13.63□□□□□ -0.23
C9orf16-203ENST00000489240 M0R3E3 92 aa13.62□□□□□ -0.23
C9orf16-203ENST00000489240 ZNF688P0C7X2 276 aa13.62□□□□□ -0.23
C9orf16-203ENST00000489240 EIF4E3Q8N5X7 224 aaKnown RBP13.62□□□□□ -0.23
C9orf16-203ENST00000489240 HIST1H2BAQ96A08 127 aa13.62□□□□□ -0.23
C9orf16-203ENST00000489240 TREM1Q9NP99 234 aa13.62□□□□□ -0.23
C9orf16-203ENST00000489240 VWFP04275 2813 aa13.62□□□□□ -0.23
C9orf16-203ENST00000489240 TMEM250H0YL14 139 aa13.61□□□□□ -0.23
C9orf16-203ENST00000489240 SRSF3P84103 164 aaKnown RBP13.61□□□□□ -0.23
C9orf16-203ENST00000489240 BEAN1Q3B7T3 259 aa13.61□□□□□ -0.23
C9orf16-203ENST00000489240 PSMG4Q5JS54 123 aa13.61□□□□□ -0.23
C9orf16-203ENST00000489240 FAM24BQ8N5W8 94 aa13.61□□□□□ -0.23
C9orf16-203ENST00000489240 RPUSD4Q96CM3 377 aaKnown RBP13.61□□□□□ -0.23
C9orf16-203ENST00000489240 C20orf173Q96LM9 149 aa13.61□□□□□ -0.23
C9orf16-203ENST00000489240 RPH3ALQ9UNE2 315 aa13.61□□□□□ -0.23
C9orf16-203ENST00000489240 SERTM2A0A1B0GWG4 89 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
C9orf16-203ENST00000489240 K7EQM0 130 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 PEX7O00628 323 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 TCRAP04437 139 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 SRP19P09132 144 aaKnown RBP13.6□□□□□ -0.23
C9orf16-203ENST00000489240 GNG5P63218 68 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 ATG101Q9BSB4 218 aa13.6□□□□□ -0.23
C9orf16-203ENST00000489240 ZMAT5Q9UDW3 170 aaKnown RBP13.6□□□□□ -0.23
C9orf16-203ENST00000489240 SCO2A0A1W2PP80 73 aa13.59□□□□□ -0.23
C9orf16-203ENST00000489240 DIRC3C9JPN6 131 aa13.59□□□□□ -0.23
C9orf16-203ENST00000489240 CYB561D1Q8N8Q1 229 aa13.59□□□□□ -0.23
C9orf16-203ENST00000489240 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
C9orf16-203ENST00000489240 MAP6D1Q9H9H5 199 aa13.59□□□□□ -0.23
C9orf16-203ENST00000489240 RBAKDNA6NC62 111 aa13.58□□□□□ -0.24
C9orf16-203ENST00000489240 AKR1C3P42330 323 aa13.58□□□□□ -0.24
C9orf16-203ENST00000489240 DEFB131AP59861 70 aa13.58□□□□□ -0.24
C9orf16-203ENST00000489240 OXLD1Q5BKU9 147 aa13.58□□□□□ -0.24
C9orf16-203ENST00000489240 GOLT1AQ6ZVE7 132 aa13.58□□□□□ -0.24
C9orf16-203ENST00000489240 SLC35B3Q9H1N7 401 aa13.58□□□□□ -0.24
C9orf16-203ENST00000489240 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
C9orf16-203ENST00000489240 S100A9P06702 114 aaKnown RBP13.57□□□□□ -0.24
C9orf16-203ENST00000489240 CNN1P51911 297 aaKnown RBP13.57□□□□□ -0.24
C9orf16-203ENST00000489240 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
C9orf16-203ENST00000489240 GTSCR1Q86UQ5 136 aa13.57□□□□□ -0.24
C9orf16-203ENST00000489240 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
C9orf16-203ENST00000489240 FBLL1A6NHQ2 334 aaKnown RBP13.56□□□□□ -0.24
C9orf16-203ENST00000489240 C9JQL5 133 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 CEBPGP53567 150 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 ODF3L2Q3SX64 289 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 FOXI2Q6ZQN5 318 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 OR8A1Q8NGG7 326 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 C2CD4CQ8TF44 421 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 SORL1Q92673 2214 aa13.56□□□□□ -0.24
C9orf16-203ENST00000489240 IGKV2-40A0A087WW87 121 aaPredicted RBP13.55□□□□□ -0.24
C9orf16-203ENST00000489240 IGKV2D-40P01614 121 aaPredicted RBP13.55□□□□□ -0.24
C9orf16-203ENST00000489240 UBE2G1P62253 170 aa13.55□□□□□ -0.24
C9orf16-203ENST00000489240 SLC7A5P1Q8MH63 180 aa13.55□□□□□ -0.24
C9orf16-203ENST00000489240 TMEM75Q8N9X5 138 aa13.55□□□□□ -0.24
C9orf16-203ENST00000489240 FMC1Q96HJ9 113 aa13.55□□□□□ -0.24
C9orf16-203ENST00000489240 CITED4Q96RK1 184 aa13.55□□□□□ -0.24
C9orf16-203ENST00000489240 A0A0J9YX75 114 aa13.54□□□□□ -0.24
C9orf16-203ENST00000489240 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
C9orf16-203ENST00000489240 CD7P09564 240 aa13.54□□□□□ -0.24
C9orf16-203ENST00000489240 EGFEM1PQ0D2K5 195 aa13.54□□□□□ -0.24
C9orf16-203ENST00000489240 PARLQ9H300 379 aa13.54□□□□□ -0.24
C9orf16-203ENST00000489240 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
C9orf16-203ENST00000489240 KLF12Q9Y4X4 402 aa13.54□□□□□ -0.24
C9orf16-203ENST00000489240 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 F6UB75 175 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 SFTA3P0C7M3 94 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 PRB4P10163 310 aaPredicted RBP13.53□□□□□ -0.24
C9orf16-203ENST00000489240 TAS2R60P59551 318 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 HIST1H1AQ02539 215 aaPredicted RBP13.53□□□□□ -0.24
C9orf16-203ENST00000489240 TMEM183BQ1AE95 376 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 SOHLH1Q5JUK2 328 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 TMEM78Q5T7P6 136 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 SAMD5Q5TGI4 173 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 C9orf47Q6ZRZ4 202 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
C9orf16-203ENST00000489240 TRAV34A0A0B4J273 112 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 TRBV6-1A0A0K0K1D8 114 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 RPL35P42766 123 aaKnown RBP13.52□□□□□ -0.25
C9orf16-203ENST00000489240 DEFB1P60022 68 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 FLI1Q01543 452 aaPredicted RBP13.52□□□□□ -0.25
C9orf16-203ENST00000489240 ERCC8Q13216 396 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 ZNF674Q2M3X9 581 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 FAM74A3Q4VXF1 159 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 APRG1Q8IVJ8 170 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 LINC00479Q96M42 142 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 VGLL1Q99990 258 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 DERL1Q9BUN8 251 aa13.52□□□□□ -0.25
C9orf16-203ENST00000489240 TRAV8-1A0A0A6YYK1 113 aa13.51□□□□□ -0.25
C9orf16-203ENST00000489240 TMEM218A2RU14 115 aa13.51□□□□□ -0.25
C9orf16-203ENST00000489240 ZNF727A8MUV8 499 aa13.51□□□□□ -0.25
C9orf16-203ENST00000489240 G3V4G9 280 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms