RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 PDE6DO43924 150 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 HLA-DMBP28068 263 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 WFDC3Q8IUB2 231 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 C11orf52Q96A22 123 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 C20orf173Q96LM9 149 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 EPDR1Q9UM22 224 aa11.98□□□□□ -0.49
CLDN11-208ENST00000488989 TMEM250H0YL14 139 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 M0R3E3 92 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 SLC25A5P05141 298 aaKnown RBP11.97□□□□□ -0.49
CLDN11-208ENST00000488989 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
CLDN11-208ENST00000488989 IGLL1P15814 213 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 TFPI2P48307 235 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 BEAN1Q3B7T3 259 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 IGFL4Q6B9Z1 124 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 HIST1H2BAQ96A08 127 aa11.97□□□□□ -0.49
CLDN11-208ENST00000488989 C9JQL5 133 aa11.96□□□□□ -0.49
CLDN11-208ENST00000488989 RNF182Q8N6D2 247 aa11.96□□□□□ -0.49
CLDN11-208ENST00000488989 CMTM2Q8TAZ6 248 aa11.96□□□□□ -0.49
CLDN11-208ENST00000488989 SERTM2A0A1B0GWG4 89 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 SCO2A0A1W2PP80 73 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 DIRC3C9JPN6 131 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 PEX7O00628 323 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 TCRAP04437 139 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 CSN1S1P47710 185 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 SNRPD3P62318 126 aaKnown RBP11.95□□□□□ -0.5
CLDN11-208ENST00000488989 GNG5P63218 68 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 C2CD4CQ8TF44 421 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 ATG101Q9BSB4 218 aa11.95□□□□□ -0.5
CLDN11-208ENST00000488989 ZNF705FA8MVS1 300 aaPredicted RBP11.94□□□□□ -0.5
CLDN11-208ENST00000488989 ZNF688P0C7X2 276 aa11.94□□□□□ -0.5
CLDN11-208ENST00000488989 GUCA2BQ16661 112 aa11.94□□□□□ -0.5
CLDN11-208ENST00000488989 RPUSD4Q96CM3 377 aaKnown RBP11.94□□□□□ -0.5
CLDN11-208ENST00000488989 SLC35B3Q9H1N7 401 aa11.94□□□□□ -0.5
CLDN11-208ENST00000488989 TREM1Q9NP99 234 aa11.94□□□□□ -0.5
CLDN11-208ENST00000488989 AGRNO00468 2067 aa11.94□□□□□ -0.5
CLDN11-208ENST00000488989 DNAH3Q8TD57 4116 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 PRAC2D3DTV9 90 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
CLDN11-208ENST00000488989 SLC7A5P1Q8MH63 180 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 CYB561D1Q8N8Q1 229 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 ZNF738Q8NE65 137 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 MAP6D1Q9H9H5 199 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 KLF12Q9Y4X4 402 aa11.93□□□□□ -0.5
CLDN11-208ENST00000488989 ODF3L2Q3SX64 289 aa11.92□□□□□ -0.5
CLDN11-208ENST00000488989 PSMG4Q5JS54 123 aa11.92□□□□□ -0.5
CLDN11-208ENST00000488989 TRBV6-1A0A0K0K1D8 114 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 S100A9P06702 114 aaKnown RBP11.91□□□□□ -0.5
CLDN11-208ENST00000488989 AKR1C3P42330 323 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 DEFB131AP59861 70 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 EGFEM1PQ0D2K5 195 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 GOLT1AQ6ZVE7 132 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 C19orf73Q9NVV2 129 aa11.91□□□□□ -0.5
CLDN11-208ENST00000488989 PKD1L1Q8TDX9 2849 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 IGKV2-40A0A087WW87 121 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-208ENST00000488989 TMEM218A2RU14 115 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 FBLL1A6NHQ2 334 aaKnown RBP11.9□□□□□ -0.5
CLDN11-208ENST00000488989 K7EQM0 130 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 IGKV2D-40P01614 121 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-208ENST00000488989 IGLV2-11P01706 119 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 CNN1P51911 297 aaKnown RBP11.9□□□□□ -0.5
CLDN11-208ENST00000488989 TAS2R60P59551 318 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 OXLD1Q5BKU9 147 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 FOXI2Q6ZQN5 318 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 C9orf47Q6ZRZ4 202 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 OR8A1Q8NGG7 326 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 PARLQ9H300 379 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 SAV1Q9H4B6 383 aaPredicted RBP11.9□□□□□ -0.5
CLDN11-208ENST00000488989 PPP1R14DQ9NXH3 145 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 RPH3ALQ9UNE2 315 aa11.9□□□□□ -0.5
CLDN11-208ENST00000488989 A0A0J9YX75 114 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 A8MTW9 85 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 NPIPB6E9PJ23 425 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 CD7P09564 240 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 DEFB1P60022 68 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 FMC1Q96HJ9 113 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 CITED4Q96RK1 184 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 DERL1Q9BUN8 251 aa11.89□□□□□ -0.51
CLDN11-208ENST00000488989 OR11H12B2RN74 326 aa11.88□□□□□ -0.51
CLDN11-208ENST00000488989 RPL35P42766 123 aaKnown RBP11.88□□□□□ -0.51
CLDN11-208ENST00000488989 FAM74A3Q4VXF1 159 aa11.88□□□□□ -0.51
CLDN11-208ENST00000488989 SOHLH1Q5JUK2 328 aa11.88□□□□□ -0.51
CLDN11-208ENST00000488989 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
CLDN11-208ENST00000488989 VGLL1Q99990 258 aa11.88□□□□□ -0.51
CLDN11-208ENST00000488989 AGPAT4-IT1Q9H0P7 198 aa11.88□□□□□ -0.51
CLDN11-208ENST00000488989 ZMAT5Q9UDW3 170 aaKnown RBP11.88□□□□□ -0.51
CLDN11-208ENST00000488989 TRAV8-1A0A0A6YYK1 113 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 TRAV34A0A0B4J273 112 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 C9JCJ5 164 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 F6UB75 175 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
CLDN11-208ENST00000488989 FLI1Q01543 452 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms