RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 EDN2P20800 178 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 TAS2R60P59551 318 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 RANP62826 216 aaKnown RBP8.04□□□□□ -1.12
USP11-209ENST00000488848 NSUN5P1Q3KNT7 163 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 SOHLH1Q5JUK2 328 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 CST9LP1Q5W188 147 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 TMEM75Q8N9X5 138 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 BLNKQ8WV28 456 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 MS4A6AQ9H2W1 248 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 TREM1Q9NP99 234 aa8.04□□□□□ -1.12
USP11-209ENST00000488848 NOTCH1P46531 2555 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 IGHV3OR16-13A0A075B7E8 117 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 IGHV3-49A0A0A0MS15 119 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 IGHV3-74A0A0B4J1X5 117 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 IGHV3-66A0A0C4DH42 116 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 TRBV7-9A0A0J9YWB2 115 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 SCO2A0A1W2PP80 73 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 PGPA6NDG6 321 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 DIRC3C9JPN6 131 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 PNRC1Q12796 327 aaPredicted RBP8.03□□□□□ -1.12
USP11-209ENST00000488848 PSG3Q16557 428 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 TMEM183BQ1AE95 376 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 FMC1Q96HJ9 113 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 CITED4Q96RK1 184 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 PARLQ9H300 379 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 SORL1Q92673 2214 aa8.03□□□□□ -1.12
USP11-209ENST00000488848 TRBV20OR9-2A0A075B6H5 130 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 A8MTW9 85 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 IGLV2-11P01706 119 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 PF4P02776 101 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 PAFAH1B2P68402 229 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 HIST2H2BDQ6DRA6 164 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 TMEM61Q8N0U2 210 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 IGF2BP2-AS1Q96M15 143 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 LINC00052Q96N35 136 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 MCRIP2Q9BUT9 160 aaKnown RBP8.02□□□□□ -1.13
USP11-209ENST00000488848 MLST8Q9BVC4 326 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 ZNF256Q9Y2P7 627 aaPredicted RBP8.02□□□□□ -1.13
USP11-209ENST00000488848 LENEPQ9Y5L5 61 aa8.02□□□□□ -1.13
USP11-209ENST00000488848 H3BTX0 84 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 M0R3E3 92 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 LTAP01374 205 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 ID1P41134 155 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 RPL35P42766 123 aaKnown RBP8.01□□□□□ -1.13
USP11-209ENST00000488848 CSN1S1P47710 185 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 CD300EQ496F6 205 aaPredicted RBP8.01□□□□□ -1.13
USP11-209ENST00000488848 LCN12Q6JVE5 192 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 C12orf54Q6X4T0 127 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 CMTM2Q8TAZ6 248 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 DYNLRB2Q8TF09 96 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 C16orf92Q96LL3 132 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 CLUHP3Q96NS8 147 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 ODF3Q96PU9 254 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 SMIM7Q9BQ49 75 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 NIPSNAP3BQ9BS92 247 aa8.01□□□□□ -1.13
USP11-209ENST00000488848 OR4C46A6NHA9 309 aa8□□□□□ -1.13
USP11-209ENST00000488848 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
USP11-209ENST00000488848 F8W036 122 aa8□□□□□ -1.13
USP11-209ENST00000488848 K7EQM0 130 aa8□□□□□ -1.13
USP11-209ENST00000488848 AKR1C3P42330 323 aa8□□□□□ -1.13
USP11-209ENST00000488848 CNN1P51911 297 aaKnown RBP8□□□□□ -1.13
USP11-209ENST00000488848 SNRPD3P62318 126 aaKnown RBP8□□□□□ -1.13
USP11-209ENST00000488848 BEAN1Q3B7T3 259 aa8□□□□□ -1.13
USP11-209ENST00000488848 C9orf66Q5T8R8 295 aa8□□□□□ -1.13
USP11-209ENST00000488848 C3orf56Q8N813 242 aa8□□□□□ -1.13
USP11-209ENST00000488848 C20orf173Q96LM9 149 aa8□□□□□ -1.13
USP11-209ENST00000488848 DERL1Q9BUN8 251 aa8□□□□□ -1.13
USP11-209ENST00000488848 GPR61Q9BZJ8 451 aa8□□□□□ -1.13
USP11-209ENST00000488848 SDF2L1Q9HCN8 221 aa8□□□□□ -1.13
USP11-209ENST00000488848 NAT8Q9UHE5 227 aa8□□□□□ -1.13
USP11-209ENST00000488848 ZFP30Q9Y2G7 519 aa8□□□□□ -1.13
USP11-209ENST00000488848 ZNF727A8MUV8 499 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 IGLV2-8P01709 118 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 CMC4P56277 68 aaPredicted RBP7.99□□□□□ -1.13
USP11-209ENST00000488848 GNG5P63218 68 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 RBPMS2Q6ZRY4 209 aaKnown RBP7.99□□□□□ -1.13
USP11-209ENST00000488848 Q86TA4 180 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 LINC01551Q86U37 167 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 APRG1Q8IVJ8 170 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 SVBPQ8N300 66 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 FAM19A4Q96LR4 140 aa7.99□□□□□ -1.13
USP11-209ENST00000488848 B4DEV8 164 aa7.98□□□□□ -1.13
USP11-209ENST00000488848 SAP30O75446 220 aa7.98□□□□□ -1.13
USP11-209ENST00000488848 SNRPCP09234 159 aaKnown RBP7.98□□□□□ -1.13
USP11-209ENST00000488848 FLI1Q01543 452 aaPredicted RBP7.98□□□□□ -1.13
USP11-209ENST00000488848 TMEM241Q24JQ0 296 aa7.98□□□□□ -1.13
USP11-209ENST00000488848 FOXI2Q6ZQN5 318 aa7.98□□□□□ -1.13
USP11-209ENST00000488848 GOLT1AQ6ZVE7 132 aa7.98□□□□□ -1.13
USP11-209ENST00000488848 LINC00477Q96M19 166 aa7.98□□□□□ -1.13
USP11-209ENST00000488848 A0A087WWC5 75 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 A0A0J9YX75 114 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 PRAC2D3DTV9 90 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 DNASE2O00115 360 aaPredicted RBP7.97□□□□□ -1.13
USP11-209ENST00000488848 CRISP2P16562 243 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 HLA-DMBP28068 263 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 GNG4P50150 75 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 UBE2G1P62253 170 aa7.97□□□□□ -1.13
USP11-209ENST00000488848 RPL23P62829 140 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms