RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 OR8A1Q8NGG7 326 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 GATAD1Q8WUU5 269 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 RPUSD4Q96CM3 377 aaKnown RBP4.67□□□□□ -1.66
PTPRD-212ENST00000488774 RARRES2Q99969 163 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 VGLL1Q99990 258 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 MFFQ9GZY8 342 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 HRH4Q9H3N8 390 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 TP53TG1Q9Y2A0 90 aa4.67□□□□□ -1.66
PTPRD-212ENST00000488774 IGHV3OR16-12A0A075B7B8 117 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 ZNF705GA8MUZ8 300 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-212ENST00000488774 UBE2CO00762 179 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 ARPC5O15511 151 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 MPDU1O75352 247 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 FHITP49789 147 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 SMCPP49901 116 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-212ENST00000488774 PSG9Q00887 426 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 HIST1H1AQ02539 215 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-212ENST00000488774 PXDC1Q5TGL8 231 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 FAM122CQ6P4D5 195 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 Q6ZRG5 221 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 BPIFA4PQ86YQ2 179 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 FAM19A4Q96LR4 140 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 RPRMQ9NS64 109 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 TMEM14CQ9P0S9 112 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 FUT9Q9Y231 359 aa4.66□□□□□ -1.66
PTPRD-212ENST00000488774 PKD1P98161 4303 aa4.65□□□□□ -1.66
PTPRD-212ENST00000488774 NPIPB6E9PJ23 425 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 J3KRW8 73 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 HIST1H1EP10412 219 aaKnown RBP4.65□□□□□ -1.67
PTPRD-212ENST00000488774 SPP1P10451 314 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 NUP62P37198 522 aaPredicted RBP4.65□□□□□ -1.67
PTPRD-212ENST00000488774 ID1P41134 155 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 GNG5P63218 68 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 ICAM4Q14773 271 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 GFI1BQ5VTD9 330 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 LCN15Q6UWW0 184 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 OR1L4Q8NGR5 311 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 Q8TAT8 98 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 RNF141Q8WVD5 230 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 TVP23CQ96ET8 276 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 CLUHP3Q96NS8 147 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 GPR82Q96P67 336 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 PAXXQ9BUH6 204 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 AGPAT4-IT1Q9H0P7 198 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 OR51M1Q9H341 326 aa4.65□□□□□ -1.67
PTPRD-212ENST00000488774 TRAV8-1A0A0A6YYK1 113 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 NBEAP1P0C6P0 100 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 PET100P0DJ07 73 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 ARL14EPLP0DKL9 152 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 MEOX2P50222 304 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 FGF8P55075 233 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-212ENST00000488774 CMC4P56277 68 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-212ENST00000488774 BTN1A1Q13410 526 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 RAB31Q13636 194 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 C12orf74Q32Q52 190 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 LGALSLQ3ZCW2 172 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-212ENST00000488774 MORN3Q6PF18 240 aaPredicted RBP4.64□□□□□ -1.67
PTPRD-212ENST00000488774 Q6ZTC4 211 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 KCNRGQ8N5I3 272 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 ZFAND2AQ8N6M9 145 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 OR2G3Q8NGZ4 309 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 RAB24Q969Q5 203 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 SGK494Q96LW2 274 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 PFDN5Q99471 154 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 C11orf68Q9H3H3 251 aaKnown RBP4.64□□□□□ -1.67
PTPRD-212ENST00000488774 TP53TG3Q9ULZ0 132 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 TIMM9Q9Y5J7 89 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
PTPRD-212ENST00000488774 GGTLC3B5MD39 225 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 C3orf84H3BNL1 204 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 BOLA2-SMG1P6H3BVE0 249 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 OR7C2O60412 319 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF324O75467 553 aaPredicted RBP4.63□□□□□ -1.67
PTPRD-212ENST00000488774 IFNA5P01569 189 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 STAG3L2P0CL84 134 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 STAG3L3P0CL85 134 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 M6PRP20645 277 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 EMP1P54849 157 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 RANP62826 216 aaKnown RBP4.63□□□□□ -1.67
PTPRD-212ENST00000488774 EBLN2Q6P2I7 272 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 OR10G4Q8NGN3 311 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 OR10G9Q8NGN4 311 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 OR10G7Q8NGN6 311 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 SUN5Q8TC36 379 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 SCGB1C1Q8TD33 95 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 IGF2BP2-AS1Q96M15 143 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 SLC50A1Q9BRV3 221 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 MRPL32Q9BYC8 188 aaKnown RBP4.63□□□□□ -1.67
PTPRD-212ENST00000488774 Q9H3A6 140 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 YTHDF2Q9Y5A9 579 aaKnown RBP4.63□□□□□ -1.67
PTPRD-212ENST00000488774 HECTD4Q9Y4D8 3996 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 PKHD1P08F94 4074 aa4.63□□□□□ -1.67
PTPRD-212ENST00000488774 TRAV12-3A0A0B4J271 114 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 ZNF253O75346 499 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 IGLV2-11P01706 119 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 GCHFRP30047 84 aa4.62□□□□□ -1.67
PTPRD-212ENST00000488774 NKX2-5P52952 324 aaPredicted RBP4.62□□□□□ -1.67
PTPRD-212ENST00000488774 RHOBP62745 196 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms