RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TRBV7-1A0A0A6YYK4 115 aa14.81□□□□□ -0.04
CCM2-216ENST00000488727 PF4P02776 101 aa14.81□□□□□ -0.04
CCM2-216ENST00000488727 PYY3Q5JQD4 70 aa14.81□□□□□ -0.04
CCM2-216ENST00000488727 HIST1H2BLQ99880 126 aa14.81□□□□□ -0.04
CCM2-216ENST00000488727 TMEM14CQ9P0S9 112 aa14.81□□□□□ -0.04
CCM2-216ENST00000488727 PKD1L1Q8TDX9 2849 aa14.81□□□□□ -0.04
CCM2-216ENST00000488727 BMPR1BO00238 502 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 PSG1P11464 419 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 PDZD11Q5EBL8 140 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 FAM231DQ6ZW35 169 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 SMIM12Q96EX1 92 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 LINC01619G3V211 115 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 IGKV1-17P01599 117 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 CLEC3BP05452 202 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 NBEAP1P0C6P0 100 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 GPR183P32249 361 aa14.8□□□□□ -0.04
CCM2-216ENST00000488727 MRPL27Q9P0M9 148 aaKnown RBP14.8□□□□□ -0.04
CCM2-216ENST00000488727 FABP4P15090 132 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 SLURP1P55000 103 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 RPL19P84098 196 aaKnown RBP14.79□□□□□ -0.04
CCM2-216ENST00000488727 TMEM183BQ1AE95 376 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 PRR31Q5SQ13 230 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 LINC00482Q8N8I6 264 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 DPF1Q92782 380 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 EPDR1Q9UM22 224 aa14.79□□□□□ -0.04
CCM2-216ENST00000488727 OR2T8A6NH00 312 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 HOXD3P31249 432 aaPredicted RBP14.78□□□□□ -0.04
CCM2-216ENST00000488727 LYZP61626 148 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 COX19Q49B96 90 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 IBA57Q5T440 356 aaKnown RBP14.78□□□□□ -0.04
CCM2-216ENST00000488727 PACRGQ96M98 296 aaPredicted RBP14.78□□□□□ -0.04
CCM2-216ENST00000488727 SLC25A39Q9BZJ4 359 aaPredicted RBP14.78□□□□□ -0.04
CCM2-216ENST00000488727 RNASE7Q9H1E1 156 aaKnown RBP14.78□□□□□ -0.04
CCM2-216ENST00000488727 KLF12Q9Y4X4 402 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 TOMM40O96008 361 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 FCGR2BP31994 310 aaPredicted RBP14.78□□□□□ -0.04
CCM2-216ENST00000488727 ARL3P36405 182 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 MFAP4P55083 255 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 Q56UQ5 140 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 FAM209BQ5JX69 171 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 GSN-AS1Q9NRJ2 163 aa14.78□□□□□ -0.04
CCM2-216ENST00000488727 TRAV30A0A087WSZ9 112 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 SMIM27A0A1W2PRY6 76 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 AMBPP02760 352 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 SLC25A5P05141 298 aaKnown RBP14.77□□□□□ -0.05
CCM2-216ENST00000488727 RD3LP0DJH9 198 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 MGST1P10620 155 aaKnown RBP14.77□□□□□ -0.05
CCM2-216ENST00000488727 ADMP35318 185 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 RANP62826 216 aaKnown RBP14.77□□□□□ -0.05
CCM2-216ENST00000488727 C5orf17Q8NAS9 161 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 ATP6V0BQ99437 205 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 CHRDL1Q9BU40 450 aa14.77□□□□□ -0.05
CCM2-216ENST00000488727 PGPA6NDG6 321 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 ZNF600Q6ZNG1 722 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 BAGE2Q86Y30 109 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 OR8I2Q8N0Y5 310 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 DLX4Q92988 240 aaPredicted RBP14.76□□□□□ -0.05
CCM2-216ENST00000488727 LINC00479Q96M42 142 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 TXN2Q99757 166 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 ATG101Q9BSB4 218 aa14.76□□□□□ -0.05
CCM2-216ENST00000488727 H3BRN7 92 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 CTSGP08311 255 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 HIST1H1EP10412 219 aaKnown RBP14.75□□□□□ -0.05
CCM2-216ENST00000488727 BLNKQ8WV28 456 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 SHANK2-AS3Q9BTD1 123 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 GNB1LQ9BYB4 327 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 MT-ND6P03923 174 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 GNG5P63218 68 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 ZNF414Q96IQ9 312 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 Q9H3A6 140 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 OTORQ9NRC9 128 aa14.75□□□□□ -0.05
CCM2-216ENST00000488727 IGHV3-35A0A0C4DH35 117 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 WI2-2373I1.2A0A1W2PRP0 233 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 GNG7O60262 68 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 CBLN1P23435 193 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 UBE2G1P62253 170 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 KLF5Q13887 457 aaPredicted RBP14.74□□□□□ -0.05
CCM2-216ENST00000488727 WDR73Q6P4I2 378 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 FMC1Q96HJ9 113 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 MRPL18Q9H0U6 180 aaKnown RBP14.74□□□□□ -0.05
CCM2-216ENST00000488727 RNF24Q9Y225 148 aa14.74□□□□□ -0.05
CCM2-216ENST00000488727 TRAV34A0A0B4J273 112 aa14.73□□□□□ -0.05
CCM2-216ENST00000488727 LEMD1Q68G75 181 aa14.73□□□□□ -0.05
CCM2-216ENST00000488727 WFDC9Q8NEX5 89 aa14.73□□□□□ -0.05
CCM2-216ENST00000488727 ZNF705GA8MUZ8 300 aaPredicted RBP14.72□□□□□ -0.05
CCM2-216ENST00000488727 TCRAP04437 139 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 SYNJ2BPP57105 145 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 S100A7AQ86SG5 101 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 GBGT1Q8N5D6 347 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 TMEM18Q96B42 140 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 RNF125Q96EQ8 232 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 GRAMD2BQ96HH9 432 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 GPR82Q96P67 336 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 ZNF586Q9NXT0 402 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 CMYA5Q8N3K9 4069 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 IZUMO1RA6ND01 250 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 GATCO43716 136 aaKnown RBP14.72□□□□□ -0.05
CCM2-216ENST00000488727 CD33P20138 364 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 NHLRC2Q8NBF2 726 aa14.72□□□□□ -0.05
CCM2-216ENST00000488727 MLST8Q9BVC4 326 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms