RNA–Protein interactions for RNA: ENST00000488338.2

LAMTOR4-210, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 4, human

TSL 3

Gene LAMTOR4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMTOR4-210	ENST00000488338		Q6ZWC4	215 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	OR4B1	Q8NGF8	309 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	OR10J6P	Q8NGY7	276 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	TMED6	Q8WW62	240 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	TM2D3	Q9BRN9	247 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	C1QTNF4	Q9BXJ3	329 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	DNAH9	Q9NYC9	4486 aa		10.88	□□□□□ -0.67
LAMTOR4-210	ENST00000488338		F6UB75	175 aa		10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	CA1	P00915	261 aa	Predicted RBP	10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	CSN1S1	P47710	185 aa		10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	RAN	P62826	216 aa	Known RBP	10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	ICAM4	Q14773	271 aa		10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	GDF5OS	Q5U4N7	250 aa		10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	OR8A1	Q8NGG7	326 aa		10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	PPP1R14D	Q9NXH3	145 aa		10.87	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	EIF3G	O75821	320 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	GCHFR	P30047	84 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	HIST1H1A	Q02539	215 aa	Predicted RBP	10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	IQCF2	Q8IXL9	164 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	EXOC3-AS1	Q8N2X6	119 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	FAM213B	Q8TBF2	198 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	RXFP4	Q8TDU9	374 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	PHYHIPL	Q96FC7	376 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338		Q9H3A6	140 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	OTOR	Q9NRC9	128 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	TP53TG1	Q9Y2A0	90 aa		10.86	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	MAP1LC3B2	A6NCE7	125 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	IGKV3-20	P01619	116 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	CNN1	P51911	297 aa	Known RBP	10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	NKX2-5	P52952	324 aa	Predicted RBP	10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	DEFB1	P60022	68 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	ZNF726P1	Q15940	193 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	CMTM2	Q8TAZ6	248 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	SUN5	Q8TC36	379 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	RCHY1	Q96PM5	261 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	MAP1LC3B	Q9GZQ8	125 aa		10.85	□□□□□ -0.67
LAMTOR4-210	ENST00000488338		A8MTW9	85 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	TEX46	H3BTG2	121 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	AMBP	P02760	352 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	SSX7	Q7RTT5	188 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	ARL6IP6	Q8N6S5	226 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	MBD3L1	Q8WWY6	194 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	TG	P01266	2768 aa		10.84	□□□□□ -0.67
LAMTOR4-210	ENST00000488338	AGRN	O00468	2067 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	PGP	A6NDG6	321 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338		M0R3E3	92 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SPRY2	O43597	315 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	H2AFB1	P0C5Y9	115 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	ZNF705D	P0CH99	300 aa	Predicted RBP	10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	ZNF705B	P0CI00	300 aa	Predicted RBP	10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SULT1A2	P50226	295 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	DEFB135	Q30KP9	77 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SFT2D1	Q8WV19	159 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	RNF183	Q96D59	192 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	NKX6-2	Q9C056	277 aa	Predicted RBP	10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338		U3KQK5	164 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	NBEAL2	Q6ZNJ1	2754 aa		10.83	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	COL7A1	Q02388	2944 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338		A0A1W2PRE2	83 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	PRAC2	D3DTV9	90 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	TSPO	P30536	169 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	FHIT	P49789	147 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	FGF8	P55075	233 aa	Predicted RBP	10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	LINC00477	Q96M19	166 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	PLA2G2E	Q9NZK7	142 aa		10.82	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	RBAKDN	A6NC62	111 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	NPIPB6	E9PJ23	425 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	BOLA2-SMG1P6	H3BVE0	249 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	PPT1	P50897	306 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	TMEM78	Q5T7P6	136 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	OVOL2	Q9BRP0	275 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SLC35B3	Q9H1N7	401 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	XCL2	Q9UBD3	114 aa		10.81	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SERTM2	A0A1B0GWG4	89 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338		K7EQM0	130 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	HBE1	P02100	147 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SLC25A5	P05141	298 aa	Known RBP	10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	AMTN	Q6UX39	209 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	C9orf47	Q6ZRZ4	202 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	ODF3	Q96PU9	254 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	TMPRSS5	Q9H3S3	457 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	ARL2-SNX15	V9GYD0	113 aa		10.8	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	DIRC3	C9JPN6	131 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	GIG44	P09565	113 aa	Predicted RBP	10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	LEP	P41159	167 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	CDKN1B	P46527	198 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	FXYD7	P58549	80 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SUMO1	P63165	101 aa	Known RBP	10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	C5orf17	Q8NAS9	161 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	RARRES2	Q99969	163 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	RETN	Q9HD89	108 aa		10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.79	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	TRAV1-1	A0A0B4J248	108 aa		10.78	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	INS	P01308	110 aa		10.78	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	UBE2G2	P60604	165 aa		10.78	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	SPINK13	Q1W4C9	94 aa		10.78	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	ALKAL2	Q6UX46	152 aa		10.78	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	CSNK1G2-AS1	Q8NCQ2	148 aa		10.78	□□□□□ -0.68
LAMTOR4-210	ENST00000488338	OR11H2	Q8NH07	326 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms