RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 HSD17B11Q8NBQ5 300 aa6.8□□□□□ -1.32
LCN2-205ENST00000487719 CSNK1G2-AS1Q8NCQ2 148 aa6.8□□□□□ -1.32
LCN2-205ENST00000487719 C17orf77Q96MU5 243 aa6.8□□□□□ -1.32
LCN2-205ENST00000487719 PSMG3Q9BT73 122 aaPredicted RBP6.8□□□□□ -1.32
LCN2-205ENST00000487719 SLC25A2Q9BXI2 301 aa6.8□□□□□ -1.32
LCN2-205ENST00000487719 ZNF586Q9NXT0 402 aa6.8□□□□□ -1.32
LCN2-205ENST00000487719 A8MTW9 85 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 M0R2Z0 102 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 OR10J4P0C629 311 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 ZNF705DP0CH99 300 aaPredicted RBP6.79□□□□□ -1.32
LCN2-205ENST00000487719 ZNF705BP0CI00 300 aaPredicted RBP6.79□□□□□ -1.32
LCN2-205ENST00000487719 HLA-DMBP28068 263 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 CDC34P49427 236 aaPredicted RBP6.79□□□□□ -1.32
LCN2-205ENST00000487719 TMEM78Q5T7P6 136 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 ZNF705AQ6ZN79 300 aaPredicted RBP6.79□□□□□ -1.32
LCN2-205ENST00000487719 LYPD1Q8N2G4 141 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 OR10G4Q8NGN3 311 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 OR10G9Q8NGN4 311 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 OR10G7Q8NGN6 311 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 CMTM2Q8TAZ6 248 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 RNF141Q8WVD5 230 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 SAT2Q96F10 170 aaPredicted RBP6.79□□□□□ -1.32
LCN2-205ENST00000487719 C20orf144Q9BQM9 153 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 TNFSF18Q9UNG2 199 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 X6R8D5 127 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 DNAH7Q8WXX0 4024 aa6.79□□□□□ -1.32
LCN2-205ENST00000487719 LOC102723971A0A1B0GUV8 181 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 ZNF705FA8MVS1 300 aaPredicted RBP6.78□□□□□ -1.32
LCN2-205ENST00000487719 ARPC5O15511 151 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 SPART-AS1P0CW21 52 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 EMP1P54849 157 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 ICAM4Q14773 271 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 FAM122CQ6P4D5 195 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
LCN2-205ENST00000487719 AMTNQ6UX39 209 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 OR2G3Q8NGZ4 309 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 RXFP4Q8TDU9 374 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
LCN2-205ENST00000487719 ODF3Q96PU9 254 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 LINC01587Q99440 93 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 NIPSNAP3BQ9BS92 247 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 WFDC1Q9HC57 220 aa6.78□□□□□ -1.32
LCN2-205ENST00000487719 ATP6V0CP27449 155 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.33
LCN2-205ENST00000487719 RANP62826 216 aaKnown RBP6.77□□□□□ -1.33
LCN2-205ENST00000487719 EIF5AP63241 154 aaKnown RBP6.77□□□□□ -1.33
LCN2-205ENST00000487719 AKR1C8PQ5T2L2 129 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 BAP18Q8IXM2 172 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 RPP25LQ8N5L8 163 aaKnown RBP6.77□□□□□ -1.33
LCN2-205ENST00000487719 C2CD4CQ8TF44 421 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 FXYD5Q96DB9 178 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 FAM167A-AS1Q96KT0 104 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 LINC00477Q96M19 166 aa6.77□□□□□ -1.33
LCN2-205ENST00000487719 ACTR3CQ9C0K3 210 aaPredicted RBP6.77□□□□□ -1.33
LCN2-205ENST00000487719 TRAV12-2A0A075B6T6 113 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 TRAV10A0A0B4J240 114 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 KANTRA0A1W2PQU2 76 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 RNF222A6NCQ9 220 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 NPIPB6E9PJ23 425 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 H7BYZ3 331 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 K7EQM0 130 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 RBMY1A1P0DJD3 496 aaKnown RBP6.76□□□□□ -1.33
LCN2-205ENST00000487719 RBMY1CP0DJD4 496 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 HTN1P15515 57 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 TCTAP57738 103 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 TAS2R60P59551 318 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 RAB2AP61019 212 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 ZNF345Q14585 488 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 RBMY1FQ15415 496 aaKnown RBP6.76□□□□□ -1.33
LCN2-205ENST00000487719 Q5BKY6 102 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 IQCF2Q8IXL9 164 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 EXOC3-AS1Q8N2X6 119 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 C16orf74Q96GX8 76 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 ARPC5LQ9BPX5 153 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 Q9H3A6 140 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 OTORQ9NRC9 128 aa6.76□□□□□ -1.33
LCN2-205ENST00000487719 A0A0D9SG52 128 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 LCE6AA0A183 80 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 J3KRW8 73 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 M0R3E3 92 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 PFDN1O60925 122 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 NDUFB4O95168 129 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 CXorf1O96002 111 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 SLC25A5P05141 298 aaKnown RBP6.75□□□□□ -1.33
LCN2-205ENST00000487719 GPX1P07203 203 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 RPL7L1Q6DKI1 246 aaKnown RBP6.75□□□□□ -1.33
LCN2-205ENST00000487719 ZNF493Q6ZR52 646 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 C1orf158Q8N1D5 194 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 PHYHIPLQ96FC7 376 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 TMEM167BQ9NRX6 74 aa6.75□□□□□ -1.33
LCN2-205ENST00000487719 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 C7orf71A4D174 169 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 LYRM9A8MSI8 78 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 SNURFLB1AK76 121 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 PRAC2D3DTV9 90 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 NMBP08949 121 aa6.74□□□□□ -1.33
LCN2-205ENST00000487719 ARL14EPLP0DKL9 152 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms