RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 TCEAL7Q9BRU2 100 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 ACTR3CQ9C0K3 210 aaPredicted RBP4.88□□□□□ -1.63
PTPRE-209ENST00000487428 SH3BGRL3Q9H299 93 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 AAMDCQ9H7C9 122 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 TMEM167BQ9NRX6 74 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 UBQLN2Q9UHD9 624 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
PTPRE-209ENST00000487428 A0A1W2PRE2 83 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 SMIM9A6NGZ8 99 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF705EA8MWA4 302 aaPredicted RBP4.87□□□□□ -1.63
PTPRE-209ENST00000487428 SLC17A3O00476 420 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 FHITP49789 147 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 ZFP69Q49AA0 526 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 ACTL10Q5JWF8 245 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 AKR1C8PQ5T2L2 129 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF705AQ6ZN79 300 aaPredicted RBP4.87□□□□□ -1.63
PTPRE-209ENST00000487428 C9orf62Q8N4C0 152 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 RXFP4Q8TDU9 374 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 C20orf173Q96LM9 149 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 FAM19A4Q96LR4 140 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 LINC00477Q96M19 166 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF471Q9BX82 626 aaPredicted RBP4.87□□□□□ -1.63
PTPRE-209ENST00000487428 C11orf68Q9H3H3 251 aaKnown RBP4.87□□□□□ -1.63
PTPRE-209ENST00000487428 RFNGQ9Y644 331 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 U3KQK5 164 aa4.87□□□□□ -1.63
PTPRE-209ENST00000487428 A0A1B0GVG6 124 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF705FA8MVS1 300 aaPredicted RBP4.86□□□□□ -1.63
PTPRE-209ENST00000487428 NPIPB6E9PJ23 425 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 SPRY2O43597 315 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 OR7C2O60412 319 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 PFDN1O60925 122 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 NDUFS6O75380 124 aaKnown RBP4.86□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF705DP0CH99 300 aaPredicted RBP4.86□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF705BP0CI00 300 aaPredicted RBP4.86□□□□□ -1.63
PTPRE-209ENST00000487428 ARL14EPLP0DKL9 152 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 PYYP10082 97 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 CRISP2P16562 243 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 GCHFRP30047 84 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 SULT1A2P50226 295 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 PPT1P50897 306 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 UBE2L3P68036 154 aaKnown RBP4.86□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF726P1Q15940 193 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF124Q15973 351 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 FAM74A1Q5RGS3 127 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 GDF5OSQ5U4N7 250 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 TMEM256Q8N2U0 113 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 LRRC20Q8TCA0 184 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 RPUSD4Q96CM3 377 aaKnown RBP4.86□□□□□ -1.63
PTPRE-209ENST00000487428 TXNDC17Q9BRA2 123 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 OVOL2Q9BRP0 275 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 OTORQ9NRC9 128 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 SELENOKQ9Y6D0 94 aa4.86□□□□□ -1.63
PTPRE-209ENST00000487428 KNCNA6PVL3 124 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 MIFP14174 115 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 TSPOP30536 169 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 CNN1P51911 297 aaKnown RBP4.85□□□□□ -1.63
PTPRE-209ENST00000487428 FAM122CQ6P4D5 195 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 RNF182Q8N6D2 247 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 C5orf17Q8NAS9 161 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 ZNF738Q8NE65 137 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 IGF2BP2-AS1Q96M15 143 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 LINC00052Q96N35 136 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 RCHY1Q96PM5 261 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 LINC00467Q9BRT7 94 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 Q9H3A6 140 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 EDA2RQ9HAV5 297 aa4.85□□□□□ -1.63
PTPRE-209ENST00000487428 KLLNB2CW77 178 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 DIRC3C9JPN6 131 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 BOLA2-SMG1P6H3BVE0 249 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 CRXO43186 299 aaPredicted RBP4.84□□□□□ -1.63
PTPRE-209ENST00000487428 CA1P00915 261 aaPredicted RBP4.84□□□□□ -1.63
PTPRE-209ENST00000487428 OR10J4P0C629 311 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 TAGLN2P37802 199 aaKnown RBP4.84□□□□□ -1.63
PTPRE-209ENST00000487428 CDKN1BP46527 198 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 CSN1S1P47710 185 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 CD300CQ08708 224 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 ICAM4Q14773 271 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 SSX7Q7RTT5 188 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 COX8CQ7Z4L0 72 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 CCDC28AQ8IWP9 274 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 OR10J6PQ8NGY7 276 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 LYPD6BQ8NI32 183 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 PLA2G2EQ9NZK7 142 aa4.84□□□□□ -1.63
PTPRE-209ENST00000487428 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.64
PTPRE-209ENST00000487428 MUC4Q99102 2169 aa4.84□□□□□ -1.64
PTPRE-209ENST00000487428 hCG_2014768A0A024R1R8 64 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 TRBV6-1A0A0K0K1D8 114 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 TEX48A0A1B0GUV7 120 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 TMEM189A5PLL7 270 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 MAP1LC3B2A6NCE7 125 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 F6UB75 175 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 TEX46H3BTG2 121 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 M0R3E3 92 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 HBE1P02100 147 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 RPL35AP18077 110 aaKnown RBP4.83□□□□□ -1.64
PTPRE-209ENST00000487428 HLA-DMBP28068 263 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 LEPP41159 167 aa4.83□□□□□ -1.64
PTPRE-209ENST00000487428 RANP62826 216 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms