RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 A0A096LNJ9 63 aa9.79□□□□□ -0.84
HSPG2-211ENST00000486901 CRXO43186 299 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-211ENST00000486901 LOXP28300 417 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-211ENST00000486901 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-211ENST00000486901 FER1L6-AS1Q8NA97 138 aa9.79□□□□□ -0.84
HSPG2-211ENST00000486901 STXBP6Q8NFX7 210 aa9.79□□□□□ -0.84
HSPG2-211ENST00000486901 AGRNO00468 2067 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 K7ERU9 68 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 TM4SF5O14894 197 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 NPYP01303 97 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 IGKV1-17P01599 117 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 IGLC1P0CG04 106 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 CKS2P33552 79 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 RIGQ13278 110 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 SMIM15Q7Z3B0 74 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 PPP1R27Q86WC6 154 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 OR1N2Q8NGR9 330 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 NDFIP1Q9BT67 221 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 SIGLEC9Q9Y336 463 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 A0A0G2JLM5 398 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 GNG7O60262 68 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 CT45A10P0DMU9 189 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 LINC01545Q5VT33 79 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 ORM1P02763 201 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 IGHV1-8P0DP01 117 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 ARL6IP6Q8N6S5 226 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 NGBQ9NPG2 151 aa9.78□□□□□ -0.84
HSPG2-211ENST00000486901 TMEM108Q6UXF1 575 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 ONECUT1Q9UBC0 465 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 MTORP42345 2549 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 COL27A1Q8IZC6 1860 aaPredicted RBP9.77□□□□□ -0.85
HSPG2-211ENST00000486901 TMEM178BH3BS89 294 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 PRSS1P07477 247 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 GTSCR1Q86UQ5 136 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 RPEQ96AT9 228 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 CSTL1Q9H114 145 aa9.77□□□□□ -0.85
HSPG2-211ENST00000486901 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 GATA4P43694 442 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 KLRD1Q13241 179 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 LINC01560Q8TB33 94 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 KLK15Q9H2R5 256 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 A1L4Q6 167 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 TMEM189A5PLL7 270 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 TRGV9Q99603 122 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 MBD3L4A6NDZ8 208 aaPredicted RBP9.76□□□□□ -0.85
HSPG2-211ENST00000486901 MBD3L3A6NE82 208 aaPredicted RBP9.76□□□□□ -0.85
HSPG2-211ENST00000486901 MBD3L5A6NJ08 208 aaPredicted RBP9.76□□□□□ -0.85
HSPG2-211ENST00000486901 HAX1O00165 279 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 ERCC8Q13216 396 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 OR2K2Q8NGT1 345 aa9.76□□□□□ -0.85
HSPG2-211ENST00000486901 MBD3L2Q8NHZ7 208 aaPredicted RBP9.76□□□□□ -0.85
HSPG2-211ENST00000486901 MRPL51Q4U2R6 128 aaKnown RBP9.75□□□□□ -0.85
HSPG2-211ENST00000486901 Q6ZQT7 251 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 C19orf67A6NJJ6 358 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 SH2D1AO60880 128 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 ZNF80P51504 273 aaPredicted RBP9.75□□□□□ -0.85
HSPG2-211ENST00000486901 FAM162BQ5T6X4 162 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 TRBV19A0A075B6N1 114 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 TRAV26-2A0A0B4J265 109 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 IGHV1-3A0A0C4DH29 117 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 NCBP2LA6PVI3 153 aaKnown RBP9.75□□□□□ -0.85
HSPG2-211ENST00000486901 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 VGLL1Q99990 258 aa9.75□□□□□ -0.85
HSPG2-211ENST00000486901 TEX22C9J3V5 150 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 TIMM23O14925 209 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 FXYD2P54710 66 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 C1orf185Q5T7R7 199 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 PRO3102Q9H379 93 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 FGF6P10767 208 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 FAM71F2Q6NXP2 309 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 RNF182Q8N6D2 247 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 WFDC12Q8WWY7 111 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 IFI27L1Q96BM0 104 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 NHP2Q9NX24 153 aaKnown RBP9.74□□□□□ -0.85
HSPG2-211ENST00000486901 JMJD1CQ15652 2540 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 EGR2P11161 476 aaPredicted RBP9.74□□□□□ -0.85
HSPG2-211ENST00000486901 TEX36Q5VZQ5 186 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 TMEM160Q9NX00 188 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 ZNF492Q9P255 531 aa9.74□□□□□ -0.85
HSPG2-211ENST00000486901 A0A0G2JNJ9 132 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 C16orf97H3BN30 126 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 OVOL3O00110 214 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 PPBPP02775 128 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 PLP1P60201 277 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 PSG3Q16557 428 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 SCNM1Q9BWG6 230 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 Q9UFV3 132 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 TMEM238C9JI98 176 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 CRYGCP07315 174 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 ORMDL3Q8N138 153 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 LEPP41159 167 aa9.73□□□□□ -0.85
HSPG2-211ENST00000486901 ATP5IP56385 69 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms