RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 DEFB104AQ8WTQ1 72 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 MRPL36Q9P0J6 103 aaKnown RBP9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 TMEM189A5PLL7 270 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 K7ERJ3 54 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 ZNF788Q6ZQV5 615 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
SHROOM3-208ENST00000486758 IGHV3OR16-10A0A075B7F0 116 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 TMEM213A2RRL7 107 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM90A9PA6NNJ1 464 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 TGFAP01135 160 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 TMEM186Q96B77 213 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 TIMD4Q96H15 378 aa9.9□□□□□ -0.83
SHROOM3-208ENST00000486758 HIVEP3Q5T1R4 2406 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 IL4P05112 153 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 CACNG8Q8WXS5 425 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 RNASE6Q93091 150 aaKnown RBP9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 F2RL2O00254 374 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 PATE2Q6UY27 113 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 ATP5L2Q7Z4Y8 100 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 PCP2Q8IVA1 136 aa9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 OSR1Q8TAX0 266 aaPredicted RBP9.89□□□□□ -0.83
SHROOM3-208ENST00000486758 MAST4O15021 2626 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 IGHV3-66A0A0C4DH42 116 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 VWC2LB2RUY7 222 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 OR4A5Q8NH83 315 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 FXYD5Q96DB9 178 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM167A-AS1Q96KT0 104 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 TM4SF5O14894 197 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM106CPP0CH98 169 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 PAX2Q02962 417 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 ECSCRQ19T08 205 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM106AQ4KMX7 169 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 Q6ZS92 163 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 BCL6BQ8N143 479 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM169BQ8N8A8 192 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 ABCA2Q9BZC7 2435 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 KLRD1Q13241 179 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 GTSCR1Q86UQ5 136 aa9.88□□□□□ -0.83
SHROOM3-208ENST00000486758 PSG3Q16557 428 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 RASL11AQ6T310 242 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 RITA1Q96K30 269 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 GRNP28799 593 aaKnown RBP9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 SEC11AP67812 179 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 SLC25A48Q6ZT89 311 aaKnown RBP9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 Q8TAT8 98 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 C17orf77Q96MU5 243 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 FOXC2Q99958 501 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 LOC107984156A0A0G2JMH3 177 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM71F2Q6NXP2 309 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 PIP4P1Q86T03 277 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 ARL17AQ8IVW1 177 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
SHROOM3-208ENST00000486758 A0A1W2PPI3 338 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 NPIPB5A8MRT5 1133 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 MS4A6AQ9H2W1 248 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 TMEM178BH3BS89 294 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 COX8AP10176 69 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 RHOGP84095 191 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 LOXL1Q08397 574 aaPredicted RBP9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 LYZL1Q6UWQ5 148 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 SCRT2Q9NQ03 307 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 C1RLQ9NZP8 487 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 Q71RC1 249 aaPredicted RBP9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 ORMDL3Q8N138 153 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 OR5AN1Q8NGI8 311 aa9.86□□□□□ -0.83
SHROOM3-208ENST00000486758 H3BVH4 76 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 UBTD1Q9HAC8 227 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 ZNF785A8K8V0 405 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 MBD6Q96DN6 1003 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 MC5RP33032 325 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 KLF5Q13887 457 aaPredicted RBP9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 DKK2Q9UBU2 259 aa9.85□□□□□ -0.83
SHROOM3-208ENST00000486758 IGKV2-40A0A087WW87 121 aaPredicted RBP9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 E7EQL1 145 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 IGKV2D-40P01614 121 aaPredicted RBP9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 SCGB1D4Q6XE38 83 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 TEX48A0A1B0GUV7 120 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 HBDP02042 147 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 PPBPP02775 128 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 HSD52Q0P140 79 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 FOXE3Q13461 319 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 ETDBQ3ZM63 59 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 Q86TA4 180 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 DDB2Q92466 427 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 ZNF747Q9BV97 191 aa9.84□□□□□ -0.83
SHROOM3-208ENST00000486758 TMEM133Q9H2Q1 129 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms