RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 XCL2Q9UBD3 114 aa8.66□□□□□ -1.02
HPS4-214ENST00000485842 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 PSG9Q00887 426 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 CD300CQ08708 224 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 AKR1C8PQ5T2L2 129 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 TMUB2Q71RG4 321 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 EXOC3-AS1Q8N2X6 119 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 RPP25LQ8N5L8 163 aaKnown RBP8.65□□□□□ -1.02
HPS4-214ENST00000485842 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
HPS4-214ENST00000485842 DNAH9Q9NYC9 4486 aa8.65□□□□□ -1.03
HPS4-214ENST00000485842 M0R3E3 92 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 C1QBP02746 253 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 ARL14EPLP0DKL9 152 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 ICAM4Q14773 271 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 PQLC2Q6ZP29 291 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 RAB24Q969Q5 203 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 CLUHP3Q96NS8 147 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 RARRES2Q99969 163 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 ACTR3CQ9C0K3 210 aaPredicted RBP8.64□□□□□ -1.03
HPS4-214ENST00000485842 PPP1R14DQ9NXH3 145 aa8.64□□□□□ -1.03
HPS4-214ENST00000485842 A8MTW9 85 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 RANP62826 216 aaKnown RBP8.63□□□□□ -1.03
HPS4-214ENST00000485842 SPINK13Q1W4C9 94 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 SSX7Q7RTT5 188 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 IQCF2Q8IXL9 164 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 OR10J6PQ8NGY7 276 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 PRELID1Q9Y255 219 aa8.63□□□□□ -1.03
HPS4-214ENST00000485842 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 BOLA2-SMG1P6H3BVE0 249 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 M0R2Z0 102 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 STAG3L2P0CL84 134 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 STAG3L3P0CL85 134 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 EIF5AP63241 154 aaKnown RBP8.62□□□□□ -1.03
HPS4-214ENST00000485842 LGALSLQ3ZCW2 172 aaPredicted RBP8.62□□□□□ -1.03
HPS4-214ENST00000485842 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 MRPL53Q96EL3 112 aaKnown RBP8.62□□□□□ -1.03
HPS4-214ENST00000485842 HYLS1Q96M11 299 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 Q9H3A6 140 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 EDA2RQ9HAV5 297 aa8.62□□□□□ -1.03
HPS4-214ENST00000485842 IGKV2-40A0A087WW87 121 aaPredicted RBP8.61□□□□□ -1.03
HPS4-214ENST00000485842 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 INSP01308 110 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 IGKV2D-40P01614 121 aaPredicted RBP8.61□□□□□ -1.03
HPS4-214ENST00000485842 TPT1P13693 172 aaKnown RBP8.61□□□□□ -1.03
HPS4-214ENST00000485842 GCHFRP30047 84 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 ZNF726P1Q15940 193 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 ZFP69Q49AA0 526 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 BAP18Q8IXM2 172 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 RPH3ALQ9UNE2 315 aa8.61□□□□□ -1.03
HPS4-214ENST00000485842 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 DEFB4AO15263 64 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 CXorf1O96002 111 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 AMBPP02760 352 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 SEC11BP0C7V7 166 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 CSN1S1P47710 185 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 ERCC8Q13216 396 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 GOLT1BQ9Y3E0 138 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 X6R8D5 127 aa8.6□□□□□ -1.03
HPS4-214ENST00000485842 IGHV4-28A0A0C4DH34 117 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 PGPA6NDG6 321 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 ZNF705EA8MWA4 302 aaPredicted RBP8.59□□□□□ -1.03
HPS4-214ENST00000485842 J3KRW8 73 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 CT45A10P0DMU9 189 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 FGF8P55075 233 aaPredicted RBP8.59□□□□□ -1.03
HPS4-214ENST00000485842 FAM74A1Q5RGS3 127 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 CMTM2Q8TAZ6 248 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 FAM213BQ8TBF2 198 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 TMED6Q8WW62 240 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 IGF2BP2-AS1Q96M15 143 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 TMEM208Q9BTX3 173 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 OTORQ9NRC9 128 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 PLA2G2EQ9NZK7 142 aa8.59□□□□□ -1.03
HPS4-214ENST00000485842 HUWE1Q7Z6Z7 4374 aaKnown RBP8.59□□□□□ -1.03
HPS4-214ENST00000485842 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
HPS4-214ENST00000485842 MIFP14174 115 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 TSPOP30536 169 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 CDKN1BP46527 198 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 FHITP49789 147 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 ZNF705AQ6ZN79 300 aaPredicted RBP8.58□□□□□ -1.04
HPS4-214ENST00000485842 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 Q8NAQ8 132 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 STOML3Q8TAV4 291 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 MUC7Q8TAX7 377 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 VGLL1Q99990 258 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 C11orf68Q9H3H3 251 aaKnown RBP8.58□□□□□ -1.04
HPS4-214ENST00000485842 TMPRSS5Q9H3S3 457 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 TMEM167BQ9NRX6 74 aa8.58□□□□□ -1.04
HPS4-214ENST00000485842 UMAD1C9J7I0 102 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms