RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 FOXI2Q6ZQN5 318 aa8.7□□□□□ -1.02
APTX-227ENST00000485479 CSTL1Q9H114 145 aa8.7□□□□□ -1.02
APTX-227ENST00000485479 TMPRSS5Q9H3S3 457 aa8.7□□□□□ -1.02
APTX-227ENST00000485479 M0R2Z0 102 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 APOC4P55056 127 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 TAS2R45P59539 299 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 BAP18Q8IXM2 172 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 SLC50A1Q9BRV3 221 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 RPH3ALQ9UNE2 315 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 RNF24Q9Y225 148 aa8.69□□□□□ -1.02
APTX-227ENST00000485479 J3KRW8 73 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 STAG3L2P0CL84 134 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 STAG3L3P0CL85 134 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 ERCC8Q13216 396 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 OVOL2Q9BRP0 275 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 ZMAT4Q9H898 229 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 TRAV12-2A0A075B6T6 113 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 IGKV2-40A0A087WW87 121 aaPredicted RBP8.68□□□□□ -1.02
APTX-227ENST00000485479 BOLA2-SMG1P6H3BVE0 249 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 IGKV2D-40P01614 121 aaPredicted RBP8.68□□□□□ -1.02
APTX-227ENST00000485479 MBP02144 154 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 TPT1P13693 172 aaKnown RBP8.68□□□□□ -1.02
APTX-227ENST00000485479 KIR3DS1Q14943 382 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 OR8A1Q8NGG7 326 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 FAM213BQ8TBF2 198 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 ACTR3CQ9C0K3 210 aaPredicted RBP8.68□□□□□ -1.02
APTX-227ENST00000485479 Q9H3A6 140 aa8.68□□□□□ -1.02
APTX-227ENST00000485479 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
APTX-227ENST00000485479 IGHV3OR16-12A0A075B7B8 117 aa8.67□□□□□ -1.02
APTX-227ENST00000485479 DEFB4AO15263 64 aa8.67□□□□□ -1.02
APTX-227ENST00000485479 GCHFRP30047 84 aa8.67□□□□□ -1.02
APTX-227ENST00000485479 GUK1Q16774 197 aa8.67□□□□□ -1.02
APTX-227ENST00000485479 U3KQK5 164 aa8.67□□□□□ -1.02
APTX-227ENST00000485479 UBE2G2P60604 165 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 GNG5P63218 68 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 SAMD13Q5VXD3 122 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 PQLC2Q6ZP29 291 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 AAMDCQ9H7C9 122 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 KIR2DL5BA0A0G2JN68 375 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 KIR2DL5BA0A0G2JPC4 375 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 CTXND1A0A1B0GTU2 59 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 MAP1LC3B2A6NCE7 125 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 PRM2P04554 102 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 SEC11BP0C7V7 166 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 PSG9Q00887 426 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 PDE6HQ13956 83 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 AMTNQ6UX39 209 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 KIR2DL5AQ8N109 375 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 KIR2DL5BQ8NHK3 375 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 STOML3Q8TAV4 291 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 SGK494Q96LW2 274 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 MAP1LC3BQ9GZQ8 125 aa8.66□□□□□ -1.02
APTX-227ENST00000485479 SPRY2O43597 315 aa8.65□□□□□ -1.02
APTX-227ENST00000485479 ZNF253O75346 499 aa8.65□□□□□ -1.02
APTX-227ENST00000485479 Q8TAT8 98 aa8.65□□□□□ -1.02
APTX-227ENST00000485479 VGLL1Q99990 258 aa8.65□□□□□ -1.02
APTX-227ENST00000485479 PGPA6NDG6 321 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 CXorf1O96002 111 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 NHLRC4P0CG21 123 aaPredicted RBP8.64□□□□□ -1.03
APTX-227ENST00000485479 ALKAL2Q6UX46 152 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 Q6ZWC4 215 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 SFT2D1Q8WV19 159 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 RNF183Q96D59 192 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 GGTLC3B5MD39 225 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 SLC51BQ86UW2 128 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
APTX-227ENST00000485479 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
APTX-227ENST00000485479 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
APTX-227ENST00000485479 CRXO43186 299 aaPredicted RBP8.63□□□□□ -1.03
APTX-227ENST00000485479 RBMY1A1P0DJD3 496 aaKnown RBP8.63□□□□□ -1.03
APTX-227ENST00000485479 RBMY1CP0DJD4 496 aa8.63□□□□□ -1.03
APTX-227ENST00000485479 CT45A10P0DMU9 189 aa8.63□□□□□ -1.03
APTX-227ENST00000485479 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
APTX-227ENST00000485479 EIF5AP63241 154 aaKnown RBP8.63□□□□□ -1.03
APTX-227ENST00000485479 RBMY1FQ15415 496 aaKnown RBP8.63□□□□□ -1.03
APTX-227ENST00000485479 RARRES2Q99969 163 aa8.63□□□□□ -1.03
APTX-227ENST00000485479 PPP1R14DQ9NXH3 145 aa8.63□□□□□ -1.03
APTX-227ENST00000485479 UBE2CO00762 179 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 MORN3Q6PF18 240 aaPredicted RBP8.62□□□□□ -1.03
APTX-227ENST00000485479 Q6ZQT7 251 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 A0A0J9YWU9 116 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 DUSP14O95147 198 aaKnown RBP8.62□□□□□ -1.03
APTX-227ENST00000485479 SLC25A5P05141 298 aaKnown RBP8.62□□□□□ -1.03
APTX-227ENST00000485479 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
APTX-227ENST00000485479 CCL20P78556 96 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 OTORQ9NRC9 128 aa8.62□□□□□ -1.03
APTX-227ENST00000485479 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
APTX-227ENST00000485479 A8MTW9 85 aa8.61□□□□□ -1.03
APTX-227ENST00000485479 UMAD1C9J7I0 102 aa8.61□□□□□ -1.03
APTX-227ENST00000485479 DIRC3C9JPN6 131 aa8.61□□□□□ -1.03
APTX-227ENST00000485479 NPIPB6E9PJ23 425 aa8.61□□□□□ -1.03
APTX-227ENST00000485479 HTN1P15515 57 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms