RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 ARV1Q9H2C2 271 aa10.76□□□□□ -0.69
HLA-DQB1-208ENST00000484729 NPVFQ9HCQ7 196 aa10.76□□□□□ -0.69
HLA-DQB1-208ENST00000484729 NBDYA0A0U1RRE5 68 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 PLAC8L1A1L4L8 177 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 F5H768 121 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 IL15RAQ13261 267 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 PATE2Q6UY27 113 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ZNF546Q86UE3 836 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 TMEM256Q8N2U0 113 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 PPP1R1CQ8WVI7 109 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 RPUSD4Q96CM3 377 aaKnown RBP10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 RNF24Q9Y225 148 aa10.75□□□□□ -0.69
HLA-DQB1-208ENST00000484729 FNDC10F2Z333 226 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 NUDT3O95989 172 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ATP5G1P05496 136 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 SNRPCP09234 159 aaKnown RBP10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ATP5G3P48201 142 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 TAS2R60P59551 318 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 STX12Q86Y82 276 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 C16orf74Q96GX8 76 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 LYRM2Q9NU23 88 aaPredicted RBP10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 DNAH5Q8TE73 4624 aa10.74□□□□□ -0.69
HLA-DQB1-208ENST00000484729 FAM24AA6NFZ4 105 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 E5RGE8 158 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 AGPAT2O15120 278 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 CXCL2P19875 107 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 CDKN1BP46527 198 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 LCN15Q6UWW0 184 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 LINC00305Q7Z4B0 112 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 C11orf1Q9H5F2 150 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 OR5AC2Q9NZP5 309 aa10.73□□□□□ -0.69
HLA-DQB1-208ENST00000484729 MRPS12O15235 138 aaKnown RBP10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 MPC2O95563 127 aa10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ARL16Q0P5N6 197 aa10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 PXDC1Q5TGL8 231 aa10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 SLC50A1Q9BRV3 221 aa10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ZNF331Q9NQX6 463 aaPredicted RBP10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 TIMM8BQ9Y5J9 83 aaPredicted RBP10.72□□□□□ -0.69
HLA-DQB1-208ENST00000484729 IGSF23A1L1A6 192 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 CBY3A6NI87 242 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 H3BTX0 84 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 CST7O76096 145 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 GIPP09681 153 aaPredicted RBP10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 SULT1A1P50225 295 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 HBG1P69891 147 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 HBG2P69892 147 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 THAP6Q8TBB0 222 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 ASB13Q8WXK3 278 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 GGACTQ9BVM4 153 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 PARD6GQ9BYG4 376 aaPredicted RBP10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 SLC25A31Q9H0C2 315 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 MBD2Q9UBB5 411 aa10.71□□□□□ -0.69
HLA-DQB1-208ENST00000484729 EPM2AB3EWF7 344 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 H0YIZ8 118 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 H7BYZ3 331 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 SLC17A3O00476 420 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 CCL18P55774 89 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 TMEM252Q8N6L7 170 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 RNF141Q8WVD5 230 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 MGST2Q99735 147 aa10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 NOP10Q9NPE3 64 aaKnown RBP10.7□□□□□ -0.7
HLA-DQB1-208ENST00000484729 INAFM2P0DMQ5 153 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 CLINT1Q14677 625 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 KIR3DS1Q14943 382 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 OPCMLQ14982 345 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 MORN5Q5VZ52 161 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 C10orf113Q5VZT2 155 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 TMEM37Q8WXS4 190 aa10.69□□□□□ -0.7
HLA-DQB1-208ENST00000484729 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 J3KRW8 73 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 GFI1BQ5VTD9 330 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 CCDC28AQ8IWP9 274 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 PXMP4Q9Y6I8 212 aa10.68□□□□□ -0.7
HLA-DQB1-208ENST00000484729 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 S100A11P31949 105 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 CAMLGP49069 296 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 BAXQ07812 192 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 OR5I1Q13606 314 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 RAB31Q13636 194 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 Q6ZRG5 221 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 OR2T35Q8NGX2 323 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 UQCC1Q9NVA1 299 aa10.67□□□□□ -0.7
HLA-DQB1-208ENST00000484729 hCG_2014768A0A024R1R8 64 aa10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 H3BQ15 152 aa10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 RPL12P30050 165 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 NHLH2Q02577 135 aa10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
HLA-DQB1-208ENST00000484729 SSX7Q7RTT5 188 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms