RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 DNAH5Q8TE73 4624 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 TRAV26-1A0A087WT03 109 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 A0A0J9YY99 117 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 A0A1B0GUV1 79 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 PLAC8L1A1L4L8 177 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 INMT-MINDY4F8WBC2 141 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 SMLR1H3BR10 107 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 CRXO43186 299 aaPredicted RBP4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 OR5AC1P0C628 307 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 AZU1P20160 251 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 TSPOP30536 169 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 MEOX2P50222 304 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 CCR6P51684 374 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 CNN1P51911 297 aaKnown RBP4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 OR5I1Q13606 314 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 OR2F1Q13607 317 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 MEF2DQ14814 521 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 SCGB2B2Q4G0G5 96 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 PAPPA-AS1Q5QFB9 102 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 SAMD13Q5VXD3 122 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 LHFPL1Q86WI0 220 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 FAM219AQ8IW50 185 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 ARRDC1Q8N5I2 433 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 OR11H7Q8NGC8 314 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 OR13C8Q8NGS7 320 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 GNPNAT1Q96EK6 184 aaPredicted RBP4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 MARVELD1Q9BSK0 173 aa4.13□□□□□ -1.75
SEMA3D-204ENST00000484038 TEX13DA0A0J9YY54 714 aaPredicted RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 CENPXA8MT69 81 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 PRSS47A8MTI9 375 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 A8MTW9 85 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 SNRPGP15A8MWD9 76 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 GABARAPH6UMI1 98 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 CD3DP04234 171 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 FABP1P07148 127 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 M6PRP20645 277 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 GALR1P47211 349 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 XGP55808 180 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 LINC00315P59091 139 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 B2MP61769 119 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 RRAS2P62070 204 aaPredicted RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 FGL1Q08830 312 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 AARDQ4LEZ3 155 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 NMSQ5H8A3 153 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 SLC7A5P1Q8MH63 180 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 TOMM5Q8N4H5 51 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 RNF182Q8N6D2 247 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 OR52I2Q8NH67 350 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 LHFPL5Q8TAF8 219 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 ZFAND1Q8TCF1 268 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 MARCH1Q8TCQ1 289 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 RBPMSQ93062 196 aaKnown RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 C16orf74Q96GX8 76 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 SLC35E1Q96K37 410 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 LINC01587Q99440 93 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 SLC25A39Q9BZJ4 359 aaPredicted RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 TMEM222Q9H0R3 208 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 NOP10Q9NPE3 64 aaKnown RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 MCUBQ9NWR8 336 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 RABL2AQ9UBK7 228 aaPredicted RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 TIMM8BQ9Y5J9 83 aaPredicted RBP4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
SEMA3D-204ENST00000484038 IGKV1D-37A0A075B6S9 117 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 A0A1W2PPQ1 181 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 CTDSPLO15194 276 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 B3GALNT1O75752 331 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 CDS2O95674 445 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 SMR3BP02814 79 aaPredicted RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 TCRBP04435 133 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 RHOBP62745 196 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 HIST1H1AQ02539 215 aaPredicted RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 GAMTQ14353 236 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 ESRGQ1W209 222 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 FAAP20Q6NZ36 180 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 TMEM144Q7Z5S9 345 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 LGI3Q8N145 548 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 ZNF738Q8NE65 137 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 OR4D10Q8NGI6 311 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 OR10J6PQ8NGY7 276 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 RXFP4Q8TDU9 374 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 SMIM4Q8WVI0 70 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 UPK3BQ9BT76 320 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 RSG1Q9BU20 258 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 NUDT15Q9NV35 164 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 MDFICQ9P1T7 246 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 FLVCR2Q9UPI3 526 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 C14orf166Q9Y224 244 aaKnown RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 MRPS16Q9Y3D3 137 aaKnown RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 U3KQ87 197 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 ADAP1O75689 374 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 IFNA5P01569 189 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 SULT1A3P0DMM9 295 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 SULT1A4P0DMN0 295 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 PRB4P10163 310 aaPredicted RBP4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 TAS2R60P59551 318 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 HAMPP81172 84 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 Q5BKY6 102 aa4.11□□□□□ -1.75
SEMA3D-204ENST00000484038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms