RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ARL6Q9H0F7 186 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 PRO0255Q9UI72 69 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 HHLA3Q9XRX5 114 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 SMCO3A2RU48 225 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 K7EP13 123 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 PSCAO43653 123 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 CRYGDP07320 174 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 AKAIN1P0CW23 69 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 KRTAP10-4P60372 401 aaPredicted RBP7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 SSBP1Q04837 148 aaKnown RBP7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 SPANXN5Q5MJ07 72 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 Q6ZSA8 131 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 CLVS1Q8IUQ0 354 aaPredicted RBP7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 ZNF680Q8NEM1 530 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 PRRT1Q99946 306 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 SLC50A1Q9BRV3 221 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 FUNDC2Q9BWH2 189 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 MIXL1Q9H2W2 232 aa7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 MRPL16Q9NX20 251 aaKnown RBP7.26□□□□□ -1.25
SMARCC1-205ENST00000483847 SYNGR2O43760 224 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 C1QBP02746 253 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 CXCL2P19875 107 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 LEPP41159 167 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 SRPXP78539 464 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 C15orf40Q8WUR7 153 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 SMIM4Q8WVI0 70 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 ODF3Q96PU9 254 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 ARV1Q9H2C2 271 aa7.25□□□□□ -1.25
SMARCC1-205ENST00000483847 C7orf71A4D174 169 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 E5RGE8 158 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 H3BQ15 152 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 K7EQD1 137 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 MED6O75586 246 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 OXTP01178 125 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 TCL1AP56279 114 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 RPP30P78346 268 aaKnown RBP7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 CD300CQ08708 224 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 BTN1A1Q13410 526 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 MORN5Q5VZ52 161 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 EIF4E3Q8N5X7 224 aaKnown RBP7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 CIB3Q96Q77 187 aaPredicted RBP7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 VGLL1Q99990 258 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 TP53TG3Q9ULZ0 132 aa7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 STRAPQ9Y3F4 350 aaKnown RBP7.24□□□□□ -1.25
SMARCC1-205ENST00000483847 DUXBA0A1W2PPF3 345 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 CCNKO75909 580 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 SLC25A5P05141 298 aaKnown RBP7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 ANXA3P12429 323 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 SRIP30626 198 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 SELENOTP62341 195 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 SLC38A11Q08AI6 406 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 ERCC8Q13216 396 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 WFDC2Q14508 124 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 ANXA2RQ3ZCQ2 193 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 Q6ZQT7 251 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 LINC00305Q7Z4B0 112 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 AP3S1Q92572 193 aa7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 SAT2Q96F10 170 aaPredicted RBP7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 MRPL32Q9BYC8 188 aaKnown RBP7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 RCL1Q9Y2P8 373 aaKnown RBP7.23□□□□□ -1.25
SMARCC1-205ENST00000483847 ANKRD20A5PA0PJZ0 165 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 KLLNB2CW77 178 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 ATP6V1G2O95670 118 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 SFTA3P0C7M3 94 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 SLC25A6P12236 298 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 GYPEP15421 78 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 RNASE4P34096 147 aaKnown RBP7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 RRAS2P62070 204 aaPredicted RBP7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 MRPS10P82664 201 aaKnown RBP7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 SLAQ13239 276 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 SCXQ7RTU7 201 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 C10orf126Q8N4M7 172 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 SCGB3A2Q96PL1 93 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 NAA50Q9GZZ1 169 aaKnown RBP7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 Q9HAA7 133 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 VCX3AQ9NNX9 186 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 SCP2D1Q9UJQ7 156 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 PXMP4Q9Y6I8 212 aa7.22□□□□□ -1.25
SMARCC1-205ENST00000483847 K7EPK0 472 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 CTDSP2O14595 271 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 OPCMLQ14982 345 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 LINC01620Q4KN68 170 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 IBA57Q5T440 356 aaKnown RBP7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 PRR9Q5T870 116 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 BPIFA4PQ86YQ2 179 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 LRTM2Q8N967 370 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 TMEM37Q8WXS4 190 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 ZNF479Q96JC4 524 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 FAM19A4Q96LR4 140 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 MCUBQ9NWR8 336 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 RABL2BQ9UNT1 228 aa7.21□□□□□ -1.26
SMARCC1-205ENST00000483847 A0A087WXM4 84 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 TRAV5A0A0B4J249 113 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 TRGV4A0A0C4DH28 118 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 LOC100131303A0A0U1RQF7 123 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 IBA57-AS1B1ANH7 110 aa7.2□□□□□ -1.26
SMARCC1-205ENST00000483847 M0R3E3 92 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms