RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CRYM-AS1A6NIL9 109 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 DUSP14O95147 198 aaKnown RBP5.14□□□□□ -1.59
CSDE1-206ENST00000483030 INSP01308 110 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 HTN1P15515 57 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 TSPOP30536 169 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 GALR1P47211 349 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 CCR6P51684 374 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 DLK1P80370 383 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 SAMD13Q5VXD3 122 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 BAP18Q8IXM2 172 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 OR4C16Q8NGL9 310 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 UHRF2Q96PU4 802 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 LINC01587Q99440 93 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 TRGV9Q99603 122 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 SLC25A32Q9H2D1 315 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 HSPB7Q9UBY9 170 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 GPR132Q9UNW8 380 aa5.14□□□□□ -1.59
CSDE1-206ENST00000483030 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
CSDE1-206ENST00000483030 IGKV1OR2-108A0A075B7D4 117 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 A0A087WXM4 84 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 EPM2AB3EWF7 344 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 DISC1C4P0D8 188 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 H2AFB1P0C5Y9 115 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 NBEAP1P0C6P0 100 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 NHLH2Q02577 135 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 FGL1Q08830 312 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 OR5I1Q13606 314 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 SURF2Q15527 256 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-206ENST00000483030 DNLZQ5SXM8 178 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 CST9LP1Q5W188 147 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 LYZL2Q7Z4W2 148 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 RNF182Q8N6D2 247 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 C15orf40Q8WUR7 153 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 IL22RA2Q969J5 263 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 DAZAP1Q96EP5 407 aaKnown RBP5.13□□□□□ -1.59
CSDE1-206ENST00000483030 C14orf144Q96I85 54 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 FUNDC2Q9BWH2 189 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 SLC25A39Q9BZJ4 359 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-206ENST00000483030 NIT2Q9NQR4 276 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 KCNIP3Q9Y2W7 256 aa5.13□□□□□ -1.59
CSDE1-206ENST00000483030 DNAH5Q8TE73 4624 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 HERC1Q15751 4861 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 TRAV8-2A0A0B4J237 113 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 FABP12A6NFH5 140 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 CENPXA8MT69 81 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 ARPC5O15511 151 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 DLEU1O43261 78 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 INAFM2P0DMQ5 153 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 PRB4P10163 310 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 ZNF182P17025 639 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 ORM2P19652 201 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 GATA2P23769 480 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 RAB11AP62491 216 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 RHOBP62745 196 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 ESRGQ1W209 222 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 TTC32Q5I0X7 151 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 GGNBP1Q5YKI7 109 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 TMEM182Q6ZP80 229 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 THAP8Q8NA92 274 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 OR4D5Q8NGN0 318 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 OR1B1Q8NGR6 318 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 OR1S1Q8NH92 325 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 RAB24Q969Q5 203 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 GNPNAT1Q96EK6 184 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 ALKBH7Q9BT30 221 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 Q9H3A6 140 aa5.12□□□□□ -1.59
CSDE1-206ENST00000483030 NOP10Q9NPE3 64 aaKnown RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 TIMM8BQ9Y5J9 83 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-206ENST00000483030 TRAV26-1A0A087WT03 109 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 A0A0B4J2A0 478 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 A0A0J9YY99 117 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 CFDP00746 253 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-206ENST00000483030 IAPPP10997 89 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 AKR1C4P17516 323 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 FUSP35637 526 aaKnown RBP eCLIP5.11□□□□□ -1.592e-9■□□□□ 9
CSDE1-206ENST00000483030 HIST1H1AQ02539 215 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-206ENST00000483030 SSBP1Q04837 148 aaKnown RBP5.11□□□□□ -1.59
CSDE1-206ENST00000483030 TMEM144Q7Z5S9 345 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 TMEM256Q8N2U0 113 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 ZNF738Q8NE65 137 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 OR8A1Q8NGG7 326 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 OR51S1Q8NGJ8 323 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 RXFP4Q8TDU9 374 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 C16orf74Q96GX8 76 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 TMEM147Q9BVK8 224 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 GPN1Q9HCN4 374 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-206ENST00000483030 ZNF586Q9NXT0 402 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 SHPKQ9UHJ6 478 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 SLC45A2Q9UMX9 530 aa5.11□□□□□ -1.59
CSDE1-206ENST00000483030 CTDSP2O14595 271 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 AKAIN1P0CW23 69 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 CD300CQ08708 224 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 RAB32Q13637 225 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 PSG3Q16557 428 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 ZNF493Q6ZR52 646 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 OR10J6PQ8NGY7 276 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 SFT2D1Q8WV19 159 aa5.1□□□□□ -1.59
CSDE1-206ENST00000483030 GPR82Q96P67 336 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms