RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 KLK5Q9Y337 293 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 TRPM1Q7Z4N2 1603 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 KDM6AO15550 1401 aaPredicted RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 POLEQ07864 2286 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 MYLKQ15746 1914 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 FRMPD1Q5SYB0 1578 aa1.97□□□□□ -2.09
SF3B1-210ENST00000482158 THOC2Q8NI27 1593 aaKnown RBP1.97□□□□□ -2.09
SF3B1-210ENST00000482158 SCN8AQ9UQD0 1980 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 HELZP42694 1942 aaKnown RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 PTPRSQ13332 1948 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 IGLV3-9A0A075B6K5 115 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 IGKV1-9A0A0C4DH69 117 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 ZNF727A8MUV8 499 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 C1orf196B1AJZ1 125 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 H3BQF6 201 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 I3L521 148 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 NAPSAO96009 420 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 AQP4P55087 323 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 S100A10P60903 97 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 BTG2P78543 158 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 AADACL3Q5VUY0 350 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 RPL22L1Q6P5R6 122 aaKnown RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 TRAPPC6BQ86SZ2 158 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 RPS19BP1Q86WX3 136 aaKnown RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 DAND5Q8N907 189 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 OR10AC1Q8NH08 325 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 SPACA4Q8TDM5 124 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 NAT14Q8WUY8 206 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 MAGOHBQ96A72 148 aaKnown RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 ZNF625Q96I27 306 aaPredicted RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 MIEN1Q9BRT3 115 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 DERL1Q9BUN8 251 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 IL36BQ9NZH7 164 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 RTEL1-TNFRSF6BF6WH68 1400 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 DOCK1Q14185 1865 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 MYO5AQ9Y4I1 1855 aaKnown RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 CHD3Q12873 2000 aaKnown RBP1.96□□□□□ -2.1
SF3B1-210ENST00000482158 MAPKBP1O60336 1514 aa1.96□□□□□ -2.1
SF3B1-210ENST00000482158 TCHHQ07283 1943 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 CEP164Q9UPV0 1460 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 CR1P17927 2039 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 SPHKAPQ2M3C7 1700 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 TRAV27A0A087WT01 109 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 A0A087X0T9 212 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 TRAV13-1A0A0B4J241 112 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 BBIP1A8MTZ0 92 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 CST7O76096 145 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 NDUFB2O95178 105 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 C1QAP02745 245 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 PRM2P04554 102 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 CXCL1P09341 107 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 HIST1H1DP16402 221 aaKnown RBP1.95□□□□□ -2.1
SF3B1-210ENST00000482158 PEBP1P30086 187 aaKnown RBP1.95□□□□□ -2.1
SF3B1-210ENST00000482158 ARPP19P56211 112 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 TPPP2P59282 170 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 RPL30P62888 115 aaKnown RBP1.95□□□□□ -2.1
SF3B1-210ENST00000482158 QRFPP83859 136 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 MYL5Q02045 173 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 PYY3Q5JQD4 70 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 PHF5AQ7RTV0 110 aaKnown RBP1.95□□□□□ -2.1
SF3B1-210ENST00000482158 C10orf126Q8N4M7 172 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 C5orf17Q8NAS9 161 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 PLPP5Q8NEB5 264 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 OR4X2Q8NGF9 303 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 OR8D4Q8NGM9 314 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 WFDC5Q8TCV5 224 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 ADAT1Q9BUB4 502 aaKnown RBP1.95□□□□□ -2.1
SF3B1-210ENST00000482158 MRPL32Q9BYC8 188 aaKnown RBP1.95□□□□□ -2.1
SF3B1-210ENST00000482158 NDUFB11Q9NX14 153 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 FUT9Q9Y231 359 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 MPC1Q9Y5U8 109 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 IER3IP1Q9Y5U9 82 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 V9GYS6 101 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 MCM3APO60318 1980 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 SBF2Q86WG5 1849 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 KDM5DQ9BY66 1539 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 GREB1Q4ZG55 1949 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 ANKRD36BQ8N2N9 1353 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 CASZ1Q86V15 1759 aa1.95□□□□□ -2.1
SF3B1-210ENST00000482158 ARHGEF28Q8N1W1 1705 aaKnown RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 ARAP2Q8WZ64 1704 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 ADGRB1O14514 1584 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 MED1Q15648 1581 aaPredicted RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 RGS12O14924 1447 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 A0A0G2JMM0 328 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 A0A1B0GW54 56 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 A0A1W2PPB8 328 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 OR2T8A6NH00 312 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 KIR3DP1A8MWS1 328 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 A8MWV9 139 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 H3BMG7 143 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 K7ERJ3 54 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 M0R129 80 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 TNFP01375 233 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 TCRAP04437 139 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 RNASE4P34096 147 aaKnown RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 ZNF93P35789 620 aaPredicted RBP1.94□□□□□ -2.1
SF3B1-210ENST00000482158 DYNLT3P51808 116 aa1.94□□□□□ -2.1
SF3B1-210ENST00000482158 TMEM258P61165 79 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms