RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 KLF12Q9Y4X4 402 aa9.96□□□□□ -0.82
HDAC6-224ENST00000481929 RNF213Q63HN8 5207 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 K7EQD1 137 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 MRPS12O15235 138 aaKnown RBP9.95□□□□□ -0.82
HDAC6-224ENST00000481929 MED6O75586 246 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 SLC25A5P05141 298 aaKnown RBP9.95□□□□□ -0.82
HDAC6-224ENST00000481929 SNRPCP09234 159 aaKnown RBP9.95□□□□□ -0.82
HDAC6-224ENST00000481929 PLP1P60201 277 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 SRPXP78539 464 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 ZNF415Q09FC8 603 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 FHL2Q14192 279 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 ANXA2RQ3ZCQ2 193 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 MRPL32Q9BYC8 188 aaKnown RBP9.95□□□□□ -0.82
HDAC6-224ENST00000481929 Q9HAA7 133 aa9.95□□□□□ -0.82
HDAC6-224ENST00000481929 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
HDAC6-224ENST00000481929 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
HDAC6-224ENST00000481929 C7orf71A4D174 169 aa9.94□□□□□ -0.82
HDAC6-224ENST00000481929 SELENOTP62341 195 aa9.94□□□□□ -0.82
HDAC6-224ENST00000481929 C15orf40Q8WUR7 153 aa9.94□□□□□ -0.82
HDAC6-224ENST00000481929 Q9H521 79 aa9.94□□□□□ -0.82
HDAC6-224ENST00000481929 EXTL2Q9UBQ6 330 aa9.94□□□□□ -0.82
HDAC6-224ENST00000481929 WRBO00258 174 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 RS1O15537 224 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 PITX3O75364 302 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 ANXA3P12429 323 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 GYPEP15421 78 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 SSBP1Q04837 148 aaKnown RBP9.93□□□□□ -0.82
HDAC6-224ENST00000481929 IBA57Q5T440 356 aaKnown RBP9.93□□□□□ -0.82
HDAC6-224ENST00000481929 MZT2AQ6P582 158 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 YIPF6Q96EC8 236 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 ARL6Q9H0F7 186 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 ARV1Q9H2C2 271 aa9.93□□□□□ -0.82
HDAC6-224ENST00000481929 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 IGHV3-38A0A0C4DH36 116 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 H3BTX0 84 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 SLC17A3O00476 420 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 ORM1P02763 201 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 SPANXN5Q5MJ07 72 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 BPIFA4PQ86YQ2 179 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 OR51S1Q8NGJ8 323 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 PRRT1Q99946 306 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 TXNDC17Q9BRA2 123 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
HDAC6-224ENST00000481929 H3BP45 60 aa9.91□□□□□ -0.82
HDAC6-224ENST00000481929 SYNGR2O43760 224 aa9.91□□□□□ -0.82
HDAC6-224ENST00000481929 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
HDAC6-224ENST00000481929 NCS1P62166 190 aa9.91□□□□□ -0.82
HDAC6-224ENST00000481929 LINC01556Q5JQF7 62 aa9.91□□□□□ -0.82
HDAC6-224ENST00000481929 PATE2Q6UY27 113 aa9.91□□□□□ -0.82
HDAC6-224ENST00000481929 STRAPQ9Y3F4 350 aaKnown RBP9.91□□□□□ -0.82
HDAC6-224ENST00000481929 DUXBA0A1W2PPF3 345 aa9.9□□□□□ -0.82
HDAC6-224ENST00000481929 MPDU1O75352 247 aa9.9□□□□□ -0.82
HDAC6-224ENST00000481929 BTN1A1Q13410 526 aa9.9□□□□□ -0.82
HDAC6-224ENST00000481929 SCGB3A2Q96PL1 93 aa9.9□□□□□ -0.82
HDAC6-224ENST00000481929 KLLNB2CW77 178 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 C9JCJ5 164 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 RGS13O14921 159 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 SFTA3P0C7M3 94 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 SLC25A6P12236 298 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 VBP1P61758 197 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 CD300CQ08708 224 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 WFDC2Q14508 124 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 LINC00305Q7Z4B0 112 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 CLVS1Q8IUQ0 354 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-224ENST00000481929 BLNKQ8WV28 456 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 ARPC5LQ9BPX5 153 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 CHAC1Q9BUX1 264 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 TM2D2Q9BX73 214 aa9.89□□□□□ -0.83
HDAC6-224ENST00000481929 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-224ENST00000481929 RNASE4P34096 147 aaKnown RBP9.88□□□□□ -0.83
HDAC6-224ENST00000481929 MRPS10P82664 201 aaKnown RBP9.88□□□□□ -0.83
HDAC6-224ENST00000481929 ASAH1Q13510 395 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 TDRG1Q3Y452 100 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 C4orf46Q504U0 113 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 PXDC1Q5TGL8 231 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 IQCF2Q8IXL9 164 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 AP3S1Q92572 193 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 SCP2D1Q9UJQ7 156 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 TP53TG3Q9ULZ0 132 aa9.88□□□□□ -0.83
HDAC6-224ENST00000481929 OR4E1P0C645 316 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 PPT1P50897 306 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 SAT2Q96F10 170 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-224ENST00000481929 ZNF479Q96JC4 524 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 SLC25A31Q9H0C2 315 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 VCX3AQ9NNX9 186 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 BOLA1Q9Y3E2 137 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 LRP2P98164 4655 aa9.87□□□□□ -0.83
HDAC6-224ENST00000481929 PKHD1L1Q86WI1 4243 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 IGHV1OR15-1A0A075B7D0 117 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 H3BQ15 152 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 K7EPK0 472 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 LECT2O14960 151 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 GPX1P07203 203 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 IGLC2P0DOY2 106 aa9.86□□□□□ -0.83
HDAC6-224ENST00000481929 TNFSF8P32971 234 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms