RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 CLEC5AQ9NY25 188 aa9.05□□□□□ -0.96
PTPRF-213ENST00000481019 PLECQ15149 4684 aaKnown RBP9.04□□□□□ -0.96
PTPRF-213ENST00000481019 RYR3Q15413 4870 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 HELTA6NFD8 242 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 BUB3O43684 328 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 RPL11P62913 178 aaKnown RBP9.04□□□□□ -0.96
PTPRF-213ENST00000481019 CCL20P78556 96 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 MEF2BQ02080 365 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-213ENST00000481019 TOR2AQ5JU69 321 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 SPATA31B1PQ5VZV4 182 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 SSX7Q7RTT5 188 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 DCANP1Q8TF63 244 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 RPUSD4Q96CM3 377 aaKnown RBP9.04□□□□□ -0.96
PTPRF-213ENST00000481019 FAM110AQ9BQ89 295 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 SLC35B3Q9H1N7 401 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 SACSQ9NZJ4 4579 aa9.04□□□□□ -0.96
PTPRF-213ENST00000481019 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
PTPRF-213ENST00000481019 TMEM250H0YL14 139 aa9.03□□□□□ -0.96
PTPRF-213ENST00000481019 K7EQG2 157 aa9.03□□□□□ -0.96
PTPRF-213ENST00000481019 RPL35AP18077 110 aaKnown RBP9.03□□□□□ -0.96
PTPRF-213ENST00000481019 ATF4P18848 351 aaPredicted RBP9.03□□□□□ -0.96
PTPRF-213ENST00000481019 PSG9Q00887 426 aa9.03□□□□□ -0.96
PTPRF-213ENST00000481019 LEMD1Q68G75 181 aa9.03□□□□□ -0.96
PTPRF-213ENST00000481019 C17orf77Q96MU5 243 aa9.03□□□□□ -0.96
PTPRF-213ENST00000481019 TRAV5A0A0B4J249 113 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 C11orf94C9JXX5 98 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 DNASE2O00115 360 aaPredicted RBP9.02□□□□□ -0.97
PTPRF-213ENST00000481019 PAGE4O60829 102 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 ZNF253O75346 499 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 DEFB131AP59861 70 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 FAM74A3Q4VXF1 159 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 RXFP4Q8TDU9 374 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 SCRT1Q9BWW7 348 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 TMPRSS5Q9H3S3 457 aa9.02□□□□□ -0.97
PTPRF-213ENST00000481019 LOC102724200A0A096LPH7 203 aaPredicted RBP9.01□□□□□ -0.97
PTPRF-213ENST00000481019 TRAV2A0A0B4J234 112 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 TMEM218A2RU14 115 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 ATP6V1G1O75348 118 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 OR10J4P0C629 311 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 SOHLH1Q5JUK2 328 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 SIGLEC15Q6ZMC9 328 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 FXYD5Q96DB9 178 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 SPATA25Q9BR10 227 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 SEC11CQ9BY50 192 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 AAMDCQ9H7C9 122 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 ZMAT4Q9H898 229 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 AGRNO00468 2067 aa9.01□□□□□ -0.97
PTPRF-213ENST00000481019 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 FAM74A7A6NL05 159 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 KNCNA6PVL3 124 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 K7EQM0 130 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 S100A9P06702 114 aaKnown RBP9□□□□□ -0.97
PTPRF-213ENST00000481019 CSN1S1P47710 185 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 DEFB1P60022 68 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 UBE2G2P60604 165 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 PAFAH1B2P68402 229 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 ICAM4Q14773 271 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 MORN5Q5VZ52 161 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 CMTM2Q8TAZ6 248 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 HIST1H2BAQ96A08 127 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 ZNF503Q96F45 646 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 WWC2-AS2Q96NR7 200 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 RARRES2Q99969 163 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 SLC50A1Q9BRV3 221 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 OTORQ9NRC9 128 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 PRELID1Q9Y255 219 aa9□□□□□ -0.97
PTPRF-213ENST00000481019 TRBV19A0A075B6N1 114 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 A0A087X0K7 114 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 SERTM2A0A1B0GWG4 89 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 F8W036 122 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 PYYP10082 97 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 RANP62826 216 aaKnown RBP8.99□□□□□ -0.97
PTPRF-213ENST00000481019 SUMO1P63165 101 aaKnown RBP8.99□□□□□ -0.97
PTPRF-213ENST00000481019 BLNKQ8WV28 456 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 OVOL2Q9BRP0 275 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 EDA2RQ9HAV5 297 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 NRN1Q9NPD7 142 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 RYR2Q92736 4967 aa8.99□□□□□ -0.97
PTPRF-213ENST00000481019 PGPA6NDG6 321 aa8.98□□□□□ -0.97
PTPRF-213ENST00000481019 FBLL1A6NHQ2 334 aaKnown RBP8.98□□□□□ -0.97
PTPRF-213ENST00000481019 SOCS3O14543 225 aa8.98□□□□□ -0.97
PTPRF-213ENST00000481019 EIF3GO75821 320 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPRF-213ENST00000481019 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
PTPRF-213ENST00000481019 SFTA3P0C7M3 94 aa8.98□□□□□ -0.97
PTPRF-213ENST00000481019 PSMG4Q5JS54 123 aa8.98□□□□□ -0.97
PTPRF-213ENST00000481019 C5orf17Q8NAS9 161 aa8.98□□□□□ -0.97
PTPRF-213ENST00000481019 ZNF586Q9NXT0 402 aa8.98□□□□□ -0.97
PTPRF-213ENST00000481019 LYSTQ99698 3801 aa8.97□□□□□ -0.97
PTPRF-213ENST00000481019 MRPS12O15235 138 aaKnown RBP8.97□□□□□ -0.97
PTPRF-213ENST00000481019 GIG44P09565 113 aaPredicted RBP8.97□□□□□ -0.97
PTPRF-213ENST00000481019 ID1P41134 155 aa8.97□□□□□ -0.97
PTPRF-213ENST00000481019 DEFB135Q30KP9 77 aa8.97□□□□□ -0.97
PTPRF-213ENST00000481019 CCDC28AQ8IWP9 274 aa8.97□□□□□ -0.97
PTPRF-213ENST00000481019 C20orf173Q96LM9 149 aa8.97□□□□□ -0.97
PTPRF-213ENST00000481019 NIPSNAP3BQ9BS92 247 aa8.97□□□□□ -0.97
PTPRF-213ENST00000481019 Q9H3A6 140 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms