RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
ABCF3-213ENST00000480539 M0R3E3 92 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 NBEAP1P0C6P0 100 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 ARL14EPLP0DKL9 152 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 OR8A1Q8NGG7 326 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 RAB24Q969Q5 203 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 XCL2Q9UBD3 114 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 TP53TG1Q9Y2A0 90 aa11.06□□□□□ -0.64
ABCF3-213ENST00000480539 DUSP14O95147 198 aaKnown RBP11.05□□□□□ -0.64
ABCF3-213ENST00000480539 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
ABCF3-213ENST00000480539 PSG9Q00887 426 aa11.05□□□□□ -0.64
ABCF3-213ENST00000480539 AKR1C8PQ5T2L2 129 aa11.05□□□□□ -0.64
ABCF3-213ENST00000480539 AAMDCQ9H7C9 122 aa11.05□□□□□ -0.64
ABCF3-213ENST00000480539 A8MTW9 85 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 STAG3L2P0CL84 134 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 ICAM4Q14773 271 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 LGALSLQ3ZCW2 172 aaPredicted RBP11.04□□□□□ -0.64
ABCF3-213ENST00000480539 AMTNQ6UX39 209 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 PQLC2Q6ZP29 291 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 ACTR3CQ9C0K3 210 aaPredicted RBP11.04□□□□□ -0.64
ABCF3-213ENST00000480539 NBEAL2Q6ZNJ1 2754 aa11.04□□□□□ -0.64
ABCF3-213ENST00000480539 M0R2Z0 102 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 SPINK13Q1W4C9 94 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 ZFP69Q49AA0 526 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 OR10J6PQ8NGY7 276 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
ABCF3-213ENST00000480539 HYLS1Q96M11 299 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 CLUHP3Q96NS8 147 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 Q9H3A6 140 aa11.03□□□□□ -0.64
ABCF3-213ENST00000480539 IGKV2-40A0A087WW87 121 aaPredicted RBP11.02□□□□□ -0.65
ABCF3-213ENST00000480539 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 BOLA2-SMG1P6H3BVE0 249 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 IGKV2D-40P01614 121 aaPredicted RBP11.02□□□□□ -0.65
ABCF3-213ENST00000480539 TPT1P13693 172 aaKnown RBP11.02□□□□□ -0.65
ABCF3-213ENST00000480539 GCHFRP30047 84 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 RANP62826 216 aaKnown RBP11.02□□□□□ -0.65
ABCF3-213ENST00000480539 C9orf62Q8N4C0 152 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 CSNK1G2-AS1Q8NCQ2 148 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 OR11H2Q8NH07 326 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 WWC2-AS2Q96NR7 200 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 RARRES2Q99969 163 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 PRELID1Q9Y255 219 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 STAB2Q8WWQ8 2551 aa11.02□□□□□ -0.65
ABCF3-213ENST00000480539 SEC11BP0C7V7 166 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 EIF5AP63241 154 aaKnown RBP11.01□□□□□ -0.65
ABCF3-213ENST00000480539 ERCC8Q13216 396 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 BAP18Q8IXM2 172 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 STOML3Q8TAV4 291 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 TMED6Q8WW62 240 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 EDA2RQ9HAV5 297 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 PPP1R14DQ9NXH3 145 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 PLA2G2EQ9NZK7 142 aa11.01□□□□□ -0.65
ABCF3-213ENST00000480539 DNAH7Q8WXX0 4024 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 IGHV3OR16-12A0A075B7B8 117 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 A0A0J9YWU9 116 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 NPIPB6E9PJ23 425 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 CXorf1O96002 111 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 FHITP49789 147 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 NKX2-5P52952 324 aaPredicted RBP11□□□□□ -0.65
ABCF3-213ENST00000480539 FGF8P55075 233 aaPredicted RBP11□□□□□ -0.65
ABCF3-213ENST00000480539 RPH3ALQ9UNE2 315 aa11□□□□□ -0.65
ABCF3-213ENST00000480539 TRAV12-2A0A075B6T6 113 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 MAP1LC3B2A6NCE7 125 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 FAM213BQ8TBF2 198 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 MAP1LC3BQ9GZQ8 125 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 X6R8D5 127 aa10.99□□□□□ -0.65
ABCF3-213ENST00000480539 ZNF705EA8MWA4 302 aaPredicted RBP10.98□□□□□ -0.65
ABCF3-213ENST00000480539 DEFB4AO15263 64 aa10.98□□□□□ -0.65
ABCF3-213ENST00000480539 CRXO43186 299 aaPredicted RBP10.98□□□□□ -0.65
ABCF3-213ENST00000480539 INSP01308 110 aa10.98□□□□□ -0.65
ABCF3-213ENST00000480539 CT45A10P0DMU9 189 aa10.98□□□□□ -0.65
ABCF3-213ENST00000480539 CSN1S1P47710 185 aa10.98□□□□□ -0.65
ABCF3-213ENST00000480539 TMPRSS5Q9H3S3 457 aa10.98□□□□□ -0.65
ABCF3-213ENST00000480539 TMEM167BQ9NRX6 74 aa10.98□□□□□ -0.65
ABCF3-213ENST00000480539 IGHV4-28A0A0C4DH34 117 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 PGPA6NDG6 321 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 J3KRW8 73 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 AMBPP02760 352 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 GNG5P63218 68 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 SLC51BQ86UW2 128 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 C1orf158Q8N1D5 194 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 Q8NAQ8 132 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 IGF2BP2-AS1Q96M15 143 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 VGLL1Q99990 258 aa10.97□□□□□ -0.65
ABCF3-213ENST00000480539 A0A1B0GV50 99 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.65
ABCF3-213ENST00000480539 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 CDKN1BP46527 198 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 UBE2G2P60604 165 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.65
ABCF3-213ENST00000480539 FAM74A1Q5RGS3 127 aa10.96□□□□□ -0.65
ABCF3-213ENST00000480539 TMEM78Q5T7P6 136 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms