RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 TMEM229BQ8NBD8 167 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 C8orf49Q96NF6 230 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 VCX3BQ9H321 246 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 HIGD1AQ9Y241 93 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 KLF12Q9Y4X4 402 aa6.47□□□□□ -1.37
GPNMB-211ENST00000479625 PMS2P5A8MQ11 134 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 FAM25AB3EWG3 89 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 FAM25CB3EWG5 89 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 FAM25GB3EWG6 89 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 MRPS12O15235 138 aaKnown RBP6.46□□□□□ -1.38
GPNMB-211ENST00000479625 PRAF2O60831 178 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 OR5G3P0C626 314 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 TAS2R19P59542 299 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 RAP2BP61225 183 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 ACOT7LQ6ZUV0 252 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 SCXQ7RTU7 201 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 NEGR1Q7Z3B1 354 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 PYGO2Q9BRQ0 406 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.38
GPNMB-211ENST00000479625 CACFD1Q9UGQ2 172 aa6.46□□□□□ -1.38
GPNMB-211ENST00000479625 A0A0B4J2A0 478 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 H3BP45 60 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 SPINK4O60575 86 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 C1QBP02746 253 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 LINC00869P0C866 280 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 CT45A10P0DMU9 189 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 AKR1C4P17516 323 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 ATP5IP56385 69 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-211ENST00000479625 NCS1P62166 190 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 WFDC2Q14508 124 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 MRPL23Q16540 153 aaKnown RBP6.45□□□□□ -1.38
GPNMB-211ENST00000479625 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 CYP2G1PQ6ZSU1 146 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 ZBTB8BQ8NAP8 495 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-211ENST00000479625 ZNF431Q8TF32 576 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-211ENST00000479625 YIPF6Q96EC8 236 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 ST6GAL2Q96JF0 529 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 Q9HAA7 133 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 ZNF331Q9NQX6 463 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-211ENST00000479625 EXTL2Q9UBQ6 330 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 SHPKQ9UHJ6 478 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 PRO0255Q9UI72 69 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 GPR132Q9UNW8 380 aa6.45□□□□□ -1.38
GPNMB-211ENST00000479625 RCL1Q9Y2P8 373 aaKnown RBP6.45□□□□□ -1.38
GPNMB-211ENST00000479625 SMCO3A2RU48 225 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 E5RGE8 158 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 K7EQD1 137 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 HYPMO75409 117 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 IL5P05113 134 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 ZNF415Q09FC8 603 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 BTN1A1Q13410 526 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 FHL2Q14192 279 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 SURF2Q15527 256 aaPredicted RBP6.44□□□□□ -1.38
GPNMB-211ENST00000479625 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 LCN15Q6UWW0 184 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 PATE2Q6UY27 113 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 ZNF680Q8NEM1 530 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 HHLA3Q9XRX5 114 aa6.44□□□□□ -1.38
GPNMB-211ENST00000479625 K7EP13 123 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 WRBO00258 174 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 PITX3O75364 302 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 ANXA7P20073 488 aaKnown RBP6.43□□□□□ -1.38
GPNMB-211ENST00000479625 SRIP30626 198 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 S100A7P31151 101 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 LEPP41159 167 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 TCL1AP56279 114 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 VGLL1Q99990 258 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 SLC50A1Q9BRV3 221 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 ARL6Q9H0F7 186 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
GPNMB-211ENST00000479625 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
GPNMB-211ENST00000479625 C7orf71A4D174 169 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 DISC1C4P0D8 188 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 LECT2O14960 151 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 SFTA3P0C7M3 94 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 GYPEP15421 78 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 CXCL2P19875 107 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 HNRNPA3P51991 378 aaKnown RBP6.42□□□□□ -1.38
GPNMB-211ENST00000479625 VBP1P61758 197 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 CD300CQ08708 224 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 SPANXN5Q5MJ07 72 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 MORN5Q5VZ52 161 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 Q6ZQT7 251 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 EIF4E3Q8N5X7 224 aaKnown RBP6.42□□□□□ -1.38
GPNMB-211ENST00000479625 LRTM2Q8N967 370 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 OR51S1Q8NGJ8 323 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 ARV1Q9H2C2 271 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 KCNIP3Q9Y2W7 256 aa6.42□□□□□ -1.38
GPNMB-211ENST00000479625 LOC100131303A0A0U1RQF7 123 aa6.41□□□□□ -1.38
GPNMB-211ENST00000479625 CCNKO75909 580 aa6.41□□□□□ -1.38
GPNMB-211ENST00000479625 PLP1P60201 277 aa6.41□□□□□ -1.38
GPNMB-211ENST00000479625 SLC38A11Q08AI6 406 aa6.41□□□□□ -1.38
GPNMB-211ENST00000479625 TRGV4A0A0C4DH28 118 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 IBA57-AS1B1ANH7 110 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 SYNGR2O43760 224 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 SLC25A5P05141 298 aaKnown RBP6.4□□□□□ -1.38
GPNMB-211ENST00000479625 AKAIN1P0CW23 69 aa6.4□□□□□ -1.38
GPNMB-211ENST00000479625 RRAS2P62070 204 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms