RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 TRBV24-1A0A075B6N3 115 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 ZFP92A6NM28 416 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 KNCNA6PVL3 124 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 H3BQ15 152 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 SYNGR2O43760 224 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 TAGLN2P37802 199 aaKnown RBP13.01□□□□□ -0.33
HLA-A-206ENST00000479320 ZNF90Q03938 601 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
HLA-A-206ENST00000479320 TMEM217Q8N7C4 229 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 OR11H2Q8NH07 326 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 NIPSNAP3BQ9BS92 247 aa13.01□□□□□ -0.33
HLA-A-206ENST00000479320 SRP19P09132 144 aaKnown RBP13□□□□□ -0.33
HLA-A-206ENST00000479320 AKR1C8PQ5T2L2 129 aa13□□□□□ -0.33
HLA-A-206ENST00000479320 SIGLEC15Q6ZMC9 328 aa13□□□□□ -0.33
HLA-A-206ENST00000479320 HSD17B11Q8NBQ5 300 aa13□□□□□ -0.33
HLA-A-206ENST00000479320 CIB3Q96Q77 187 aaPredicted RBP13□□□□□ -0.33
HLA-A-206ENST00000479320 TCAPO15273 167 aa12.99□□□□□ -0.33
HLA-A-206ENST00000479320 GIG44P09565 113 aaPredicted RBP12.99□□□□□ -0.33
HLA-A-206ENST00000479320 NUTF2P61970 127 aaKnown RBP12.99□□□□□ -0.33
HLA-A-206ENST00000479320 NRN1Q9NPD7 142 aa12.99□□□□□ -0.33
HLA-A-206ENST00000479320 CBY1Q9Y3M2 126 aa12.99□□□□□ -0.33
HLA-A-206ENST00000479320 ALMS1Q8TCU4 4167 aa12.99□□□□□ -0.33
HLA-A-206ENST00000479320 IGKV1OR2-108A0A075B7D4 117 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 NUPR2A6NF83 97 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 PRSS46E5RG02 174 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
HLA-A-206ENST00000479320 PSMG4Q5JS54 123 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 ACTL10Q5JWF8 245 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 OR8G2PQ6IF36 304 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
HLA-A-206ENST00000479320 TMEM183AQ8IXX5 376 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 RAB40CQ96S21 281 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 SLC25A31Q9H0C2 315 aa12.98□□□□□ -0.33
HLA-A-206ENST00000479320 ID3Q02535 119 aa12.97□□□□□ -0.33
HLA-A-206ENST00000479320 BAXQ07812 192 aa12.97□□□□□ -0.33
HLA-A-206ENST00000479320 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
HLA-A-206ENST00000479320 THAP8Q8NA92 274 aa12.97□□□□□ -0.33
HLA-A-206ENST00000479320 FAM210BQ96KR6 192 aa12.97□□□□□ -0.33
HLA-A-206ENST00000479320 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
HLA-A-206ENST00000479320 TRGV9Q99603 122 aa12.97□□□□□ -0.33
HLA-A-206ENST00000479320 SEPSECSQ9HD40 501 aaKnown RBP12.97□□□□□ -0.33
HLA-A-206ENST00000479320 VAX2Q9UIW0 290 aa12.97□□□□□ -0.33
HLA-A-206ENST00000479320 LYZP61626 148 aa12.96□□□□□ -0.33
HLA-A-206ENST00000479320 SNRPD3P62318 126 aaKnown RBP12.96□□□□□ -0.33
HLA-A-206ENST00000479320 TMEM41BQ5BJD5 291 aa12.96□□□□□ -0.33
HLA-A-206ENST00000479320 SPANXN5Q5MJ07 72 aa12.96□□□□□ -0.33
HLA-A-206ENST00000479320 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.33
HLA-A-206ENST00000479320 BTF3L4Q96K17 158 aa12.96□□□□□ -0.33
HLA-A-206ENST00000479320 C11orf68Q9H3H3 251 aaKnown RBP12.96□□□□□ -0.33
HLA-A-206ENST00000479320 LSM5Q9Y4Y9 91 aaKnown RBP12.96□□□□□ -0.33
HLA-A-206ENST00000479320 H3BP45 60 aa12.95□□□□□ -0.34
HLA-A-206ENST00000479320 DEFB4AO15263 64 aa12.95□□□□□ -0.34
HLA-A-206ENST00000479320 METTL15P1P0C7V9 234 aa12.95□□□□□ -0.34
HLA-A-206ENST00000479320 GAGE1Q13065 139 aa12.94□□□□□ -0.34
HLA-A-206ENST00000479320 C1orf194Q5T5A4 169 aa12.94□□□□□ -0.34
HLA-A-206ENST00000479320 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
HLA-A-206ENST00000479320 C11orf45Q8TAV5 145 aa12.94□□□□□ -0.34
HLA-A-206ENST00000479320 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
HLA-A-206ENST00000479320 HIST1H2BLQ99880 126 aa12.94□□□□□ -0.34
HLA-A-206ENST00000479320 WFDC1Q9HC57 220 aa12.94□□□□□ -0.34
HLA-A-206ENST00000479320 KLK5Q9Y337 293 aaPredicted RBP12.94□□□□□ -0.34
HLA-A-206ENST00000479320 PHOX2AO14813 284 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 CXCL1P09341 107 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 TRGC1P0CF51 173 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 NKX2-1P43699 371 aaPredicted RBP12.93□□□□□ -0.34
HLA-A-206ENST00000479320 NANOS2P60321 138 aaKnown RBP12.93□□□□□ -0.34
HLA-A-206ENST00000479320 ICAM4Q14773 271 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 ARL6IP6Q8N6S5 226 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 Q8NAQ8 132 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 LINC00476Q8WZB0 136 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 PYGO2Q9BRQ0 406 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 C11orf1Q9H5F2 150 aa12.93□□□□□ -0.34
HLA-A-206ENST00000479320 EPPK1P58107 5090 aaKnown RBP12.93□□□□□ -0.34
HLA-A-206ENST00000479320 H3BMM0 161 aa12.92□□□□□ -0.34
HLA-A-206ENST00000479320 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
HLA-A-206ENST00000479320 OR2G3Q8NGZ4 309 aa12.92□□□□□ -0.34
HLA-A-206ENST00000479320 SMIM3Q9BZL3 60 aa12.92□□□□□ -0.34
HLA-A-206ENST00000479320 CLEC5AQ9NY25 188 aa12.92□□□□□ -0.34
HLA-A-206ENST00000479320 PSENENQ9NZ42 101 aa12.92□□□□□ -0.34
HLA-A-206ENST00000479320 LOC102723971A0A1B0GUV8 181 aa12.91□□□□□ -0.34
HLA-A-206ENST00000479320 TRGC2P03986 189 aa12.91□□□□□ -0.34
HLA-A-206ENST00000479320 FABP4P15090 132 aa12.91□□□□□ -0.34
HLA-A-206ENST00000479320 GATA2P23769 480 aaPredicted RBP12.91□□□□□ -0.34
HLA-A-206ENST00000479320 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
HLA-A-206ENST00000479320 X6R8D5 127 aa12.91□□□□□ -0.34
HLA-A-206ENST00000479320 PMS2P5A8MQ11 134 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 SSSCA1O60232 199 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 LY6G6CO95867 125 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 LINC00614P0C842 121 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
HLA-A-206ENST00000479320 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 PAX9P55771 341 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
HLA-A-206ENST00000479320 IQCJQ1A5X6 159 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 FRZBQ92765 325 aa12.9□□□□□ -0.34
HLA-A-206ENST00000479320 IGHV4-28A0A0C4DH34 117 aa12.89□□□□□ -0.35
HLA-A-206ENST00000479320 M0R143 59 aa12.89□□□□□ -0.35
HLA-A-206ENST00000479320 SOCS3O14543 225 aa12.89□□□□□ -0.35
HLA-A-206ENST00000479320 GZMBP10144 247 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms