RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 PRSS27Q9BQR3 290 aa2.83□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM106BQ9NUM4 274 aa2.83□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF230Q9UIE0 474 aaPredicted RBP2.83□□□□□ -1.96
CCDC171-207ENST00000478913 KCNE3Q9Y6H6 103 aa2.83□□□□□ -1.96
CCDC171-207ENST00000478913 TRAV36DV7A0A075B6V5 113 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 A0A087WUJ7 227 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 TRAV25A0A0B4J276 109 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 A0A1B0GVX0 72 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM235A6NFC5 223 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 RBFOX3A6NFN3 312 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF705GA8MUZ8 300 aaPredicted RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF878C9JN71 531 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ITGB1BP1O14713 200 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 PMP2P02689 132 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 CLPSP04118 112 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 METTL15P1P0C7V9 234 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 OR5H8P0DN80 308 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 OR13C7P0DN81 318 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 PTHLHP12272 177 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 FABP4P15090 132 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ADCYAP1P18509 176 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ALOX5APP20292 161 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 MAS1LP35410 378 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 GLRXP35754 106 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 GPX4P36969 197 aaPredicted RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 KIR3DL2P43630 455 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 LPAR6P43657 344 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 CSNK1A1P48729 337 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 CDC34P49427 236 aaPredicted RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF141Q15928 474 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ACOT6Q3I5F7 207 aaPredicted RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 TRMT12Q53H54 448 aaKnown RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 TCF24Q7RTU0 167 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 SLC16A14Q7RTX9 510 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 LGI3Q8N145 548 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 OTOSQ8NHW6 89 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 SCGB1C1Q8TD33 95 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 AQP3Q92482 292 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 RGP1Q92546 391 aaPredicted RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 GALNT14Q96FL9 552 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ACY3Q96HD9 319 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ABHD14BQ96IU4 210 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 Q96M85 177 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 WFDC6Q9BQY6 131 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 ADAT1Q9BUB4 502 aaKnown RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 CHST5Q9GZS9 411 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 CHST6Q9GZX3 395 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 OR51B6Q9H340 312 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 TAS2R4Q9NYW5 299 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 MRM2Q9UI43 246 aaKnown RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 OR52A1Q9UKL2 312 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 CES1P1Q9UKY3 287 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 PSG8Q9UQ74 426 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 POLR1DQ9Y2S0 133 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 STARD10Q9Y365 291 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 LSM5Q9Y4Y9 91 aaKnown RBP2.82□□□□□ -1.96
CCDC171-207ENST00000478913 R4GMQ9 66 aa2.82□□□□□ -1.96
CCDC171-207ENST00000478913 TRAV8-7A0A075B6U6 113 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 A0A1B0GV90 55 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM269A0A1B0GVZ9 245 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 LOC107986453A0A1B0GWG9 222 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 SERPINE3A8MV23 424 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 FTCDNL1E5RQL4 147 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 H3BQ15 152 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 SLC16A7O60669 478 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 YIF1AO95070 293 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 IGHV1-46P01743 117 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ISG15P05161 165 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 CTSDP07339 412 aaPredicted RBP2.81□□□□□ -1.96
CCDC171-207ENST00000478913 CST2P09228 141 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 CT62P0C5K7 136 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 RD3LP0DJH9 198 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF728P0DKX0 622 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 IGHV1-8P0DP01 117 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H1DP16402 221 aaKnown RBP2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TUBG1P23258 451 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 IL12BP29460 328 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 OR10J1P30954 320 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF93P35789 620 aaPredicted RBP2.81□□□□□ -1.96
CCDC171-207ENST00000478913 AKR1C3P42330 323 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 KRTAP10-4P60372 401 aaPredicted RBP2.81□□□□□ -1.96
CCDC171-207ENST00000478913 RAB11AP62491 216 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 HIST1H3AP68431 136 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 HLA-DRB3P79483 266 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF117Q03924 483 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 BAXQ07812 192 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 MOBPQ13875 183 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 KIR2DS1Q14954 304 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 KHDC3LQ587J8 217 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 MESTQ5EB52 335 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 ZNF684Q5T5D7 378 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 RPL7L1Q6DKI1 246 aaKnown RBP2.81□□□□□ -1.96
CCDC171-207ENST00000478913 HEPN1Q6WQI6 88 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TEX43Q6ZNM6 134 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 OLIG3Q7RTU3 272 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 OSR2Q8N2R0 312 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 GATSQ8NAP1 163 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 NECAP1Q8NC96 275 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 TMEM104Q8NE00 496 aa2.81□□□□□ -1.96
CCDC171-207ENST00000478913 OR52R1Q8NGF1 315 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms