RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PSG3Q16557 428 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 ACOT6Q3I5F7 207 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 FAM122CQ6P4D5 195 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 Q6ZNX1 250 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 OR11H4Q8NGC9 324 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 RPUSD4Q96CM3 377 aaKnown RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 FAM167A-AS1Q96KT0 104 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 RARRES2Q99969 163 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 PAXXQ9BUH6 204 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 ZNF586Q9NXT0 402 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 TMEM14CQ9P0S9 112 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 TP53TG1Q9Y2A0 90 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 TIMM9Q9Y5J7 89 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 TRBV19A0A075B6N1 114 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 A0A0J9YWU9 116 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 A0A1W2PPV4 95 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 HMGB3O15347 200 aaKnown RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 HIST1H1EP10412 219 aaKnown RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 M6PRP20645 277 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 CNN1P51911 297 aaKnown RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 TAS2R45P59539 299 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 UBE2L3P68036 154 aaKnown RBP5.04□□□□□ -1.6
BRCA1-215ENST00000478531 GUK1Q16774 197 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 KHDC3LQ587J8 217 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 OR10G4Q8NGN3 311 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 OR10G9Q8NGN4 311 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 OR10G7Q8NGN6 311 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 OR11H2Q8NH07 326 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 SLC35B3Q9H1N7 401 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 OR51M1Q9H341 326 aa5.04□□□□□ -1.6
BRCA1-215ENST00000478531 IGHV3OR16-12A0A075B7B8 117 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 M0R2Z0 102 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 CDC34P49427 236 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-215ENST00000478531 PSG9Q00887 426 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 EXOC3-AS1Q8N2X6 119 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 OR8A1Q8NGG7 326 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 SAT2Q96F10 170 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-215ENST00000478531 PHYHIPLQ96FC7 376 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 ST6GAL2Q96JF0 529 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 PSMG3Q9BT73 122 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-215ENST00000478531 C1QTNF4Q9BXJ3 329 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 EDA2RQ9HAV5 297 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
BRCA1-215ENST00000478531 A4D1N5 150 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 PRAC2D3DTV9 90 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 M0R3E3 92 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 TAAR5O14804 337 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 DEFB4AO15263 64 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 JTBO76095 146 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 DUSP14O95147 198 aaKnown RBP5.02□□□□□ -1.61
BRCA1-215ENST00000478531 NDUFB4O95168 129 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 NBEAP1P0C6P0 100 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 PDE6HQ13956 83 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF345Q14585 488 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 SPINK13Q1W4C9 94 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 TMEM41BQ5BJD5 291 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 AKAP14Q86UN6 197 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 OR10J6PQ8NGY7 276 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 OR2G3Q8NGZ4 309 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 RNF141Q8WVD5 230 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 FXYD5Q96DB9 178 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 GNPNAT1Q96EK6 184 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF503Q96F45 646 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 AAMDCQ9H7C9 122 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 KMT2CQ8NEZ4 4911 aaKnown RBP5.02□□□□□ -1.61
BRCA1-215ENST00000478531 DYNC2H1Q8NCM8 4307 aaKnown RBP5.02□□□□□ -1.61
BRCA1-215ENST00000478531 KANTRA0A1W2PQU2 76 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 HMSDA8MTL9 139 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 PFDN1O60925 122 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF253O75346 499 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 MBP02144 154 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ARL14EPLP0DKL9 152 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 PCP4P48539 62 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 SERF2P84101 59 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 PMS2P11Q13670 270 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ICAM4Q14773 271 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ZFAND6Q6FIF0 208 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 BAP18Q8IXM2 172 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 KCNRGQ8N5I3 272 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 RPP25LQ8N5L8 163 aaKnown RBP5.02□□□□□ -1.61
BRCA1-215ENST00000478531 CLRN3Q8NCR9 226 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
BRCA1-215ENST00000478531 ZNF471Q9BX82 626 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-215ENST00000478531 PLECQ15149 4684 aaKnown RBP5.01□□□□□ -1.61
BRCA1-215ENST00000478531 TRAV12-2A0A075B6T6 113 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 A0A0D9SG52 128 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 A0A1B0GVG6 124 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 BCL2L11O43521 198 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 RANP62826 216 aaKnown RBP5.01□□□□□ -1.61
BRCA1-215ENST00000478531 AKR1C8PQ5T2L2 129 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 AMTNQ6UX39 209 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 PQLC2Q6ZP29 291 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 SSX7Q7RTT5 188 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 TCTE3Q8IZS6 198 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 CSNK1G2-AS1Q8NCQ2 148 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 TMEM208Q9BTX3 173 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 CYTL1Q9NRR1 136 aa5.01□□□□□ -1.61
BRCA1-215ENST00000478531 IGKV2-40A0A087WW87 121 aaPredicted RBP5□□□□□ -1.61
BRCA1-215ENST00000478531 IGHV4-28A0A0C4DH34 117 aa5□□□□□ -1.61
BRCA1-215ENST00000478531 INSP01308 110 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms