RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PVRIGQ6DKI7 326 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 SLC25A34Q6PIV7 304 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 Q6ZS92 163 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 NFE4Q86UQ8 179 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 ARL6IP6Q8N6S5 226 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 Q8N976 141 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM75Q8N9X5 138 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 OR4F17Q8NGA8 305 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 OR2T6Q8NHC8 308 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 RCHY1Q96PM5 261 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 NDFIP1Q9BT67 221 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 RAB1BQ9H0U4 201 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM133Q9H2Q1 129 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 DYNLRB1Q9NP97 96 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 ASCL3Q9NQ33 180 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 ZNF835Q9Y2P0 537 aa3.36□□□□□ -1.87
GPNMB-210ENST00000478451 F11RQ9Y624 299 aaKnown RBP3.36□□□□□ -1.87
GPNMB-210ENST00000478451 VCANP13611 3396 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 TNCP24821 2201 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 IGKV1D-37A0A075B6S9 117 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 LOC102724200A0A096LPH7 203 aaPredicted RBP3.35□□□□□ -1.87
GPNMB-210ENST00000478451 TRAV5A0A0B4J249 113 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1B0GUT8 65 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 A0A1W2PPI3 338 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 IGLC7A0M8Q6 106 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 C19orf71A6NCJ1 209 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 C2orf70A6NJV1 201 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 SYS1-DBNDD2H3BUS1 97 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 FSTL3O95633 263 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 IGLV2-23P01705 113 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 HLA-DRB1P01911 266 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 TCRAP04437 139 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 CT45A10P0DMU9 189 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV1-8P0DP01 117 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 GP9P14770 177 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 HTR1DP28221 377 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 CEACAM3P40198 252 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 CCL8P80075 99 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 GAGE5Q13069 117 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 GAGE6Q13070 117 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 PDE6HQ13956 83 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 TDRG1Q3Y452 100 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 TMEM155Q4W5P6 130 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 Q56UQ5 140 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 FAM201AQ5SY85 155 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 PATE2Q6UY27 113 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 FA2HQ7L5A8 372 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 MOB3BQ86TA1 216 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 Q86TA4 180 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 BPIFA4PQ86YQ2 179 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 MUC15Q8N387 334 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 FAM19A2Q8N3H0 131 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 GATD1Q8NB37 220 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 OR10AG1Q8NH19 301 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 BLNKQ8WV28 456 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 FAM122AQ96E09 287 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 RASL11BQ9BPW5 248 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 CLEC7AQ9BXN2 247 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 Q9H3A6 140 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 RPH3ALQ9UNE2 315 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 FAM215AQ9Y5M1 114 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 INSIG2Q9Y5U4 225 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 NAV3Q8IVL0 2385 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
GPNMB-210ENST00000478451 WDFY3Q8IZQ1 3526 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV1-24A0A0C4DH33 117 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 TCF21O43680 179 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 MOSP00540 346 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 CA1P00915 261 aaPredicted RBP3.34□□□□□ -1.87
GPNMB-210ENST00000478451 IGHV4-39P01824 125 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 CFC1BP0CG36 223 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 CFC1P0CG37 223 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 CCL3L1P16619 93 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 HINT1P49773 126 aaPredicted RBP3.34□□□□□ -1.87
GPNMB-210ENST00000478451 FOXA3P55318 350 aaPredicted RBP3.34□□□□□ -1.87
GPNMB-210ENST00000478451 HILS1P60008 231 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 LYZP61626 148 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 GNG5P63218 68 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 PSG9Q00887 426 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 HIST1H1AQ02539 215 aaPredicted RBP3.34□□□□□ -1.87
GPNMB-210ENST00000478451 SPRNQ5BIV9 151 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 DUX4L9Q6RFH8 374 aaPredicted RBP3.34□□□□□ -1.87
GPNMB-210ENST00000478451 TCF24Q7RTU0 167 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 SPATA12Q7Z6I5 190 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 PPP1R27Q86WC6 154 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 DEFB124Q8NES8 71 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 OR4C5Q8NGB2 326 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 OR1N2Q8NGR9 330 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 PGLYRP4Q96LB8 373 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 C17orf77Q96MU5 243 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 AP1S3Q96PC3 154 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 FNDC4Q9H6D8 234 aaPredicted RBP3.34□□□□□ -1.87
GPNMB-210ENST00000478451 Q9H8V8 135 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 THYN1Q9P016 225 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 SIGLEC9Q9Y336 463 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 ZDBF2Q9HCK1 2354 aa3.34□□□□□ -1.87
GPNMB-210ENST00000478451 MALRD1Q5VYJ5 2156 aa3.34□□□□□ -1.88
GPNMB-210ENST00000478451 KNTC1P50748 2209 aa3.34□□□□□ -1.88
GPNMB-210ENST00000478451 PLCE1Q9P212 2302 aa3.33□□□□□ -1.88
GPNMB-210ENST00000478451 FRYLO94915 3013 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 218.1 ms