RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OR8A1Q8NGG7 326 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 OR10G4Q8NGN3 311 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 OR10G9Q8NGN4 311 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 OR10G7Q8NGN6 311 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 OR2G3Q8NGZ4 309 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 OR11H2Q8NH07 326 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 RNF141Q8WVD5 230 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 FXYD5Q96DB9 178 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF503Q96F45 646 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 ST6GAL2Q96JF0 529 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 RARRES2Q99969 163 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 M0R2Z0 102 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 M0R3E3 92 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 DEFB4AO15263 64 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF253O75346 499 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 DUSP14O95147 198 aaKnown RBP7.47□□□□□ -1.21
HDAC6-222ENST00000478095 NBEAP1P0C6P0 100 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 TAS2R45P59539 299 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 TMEM41BQ5BJD5 291 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 AMTNQ6UX39 209 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 EXOC3-AS1Q8N2X6 119 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 KCNRGQ8N5I3 272 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 CSNK1G2-AS1Q8NCQ2 148 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 PHYHIPLQ96FC7 376 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 PSMG3Q9BT73 122 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-222ENST00000478095 CYTL1Q9NRR1 136 aa7.47□□□□□ -1.21
HDAC6-222ENST00000478095 IGHV3OR16-12A0A075B7B8 117 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 A0A1B0GVG6 124 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 HMSDA8MTL9 139 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 A8MTW9 85 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 TAAR5O14804 337 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 JTBO76095 146 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 CDC34P49427 236 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-222ENST00000478095 PDE6HQ13956 83 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 ZNF345Q14585 488 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 ICAM4Q14773 271 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 SPINK13Q1W4C9 94 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 ZFAND6Q6FIF0 208 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 RPP25LQ8N5L8 163 aaKnown RBP7.46□□□□□ -1.22
HDAC6-222ENST00000478095 MUC7Q8TAX7 377 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 GNPNAT1Q96EK6 184 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-222ENST00000478095 CLUHP3Q96NS8 147 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 ARPC5LQ9BPX5 153 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 C1QTNF4Q9BXJ3 329 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 PPP1R14DQ9NXH3 145 aa7.46□□□□□ -1.22
HDAC6-222ENST00000478095 TRAV12-2A0A075B6T6 113 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 BCL2L11O43521 198 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 RANP62826 216 aaKnown RBP7.45□□□□□ -1.22
HDAC6-222ENST00000478095 SERF2P84101 59 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 SSX7Q7RTT5 188 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 AKAP14Q86UN6 197 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 BAP18Q8IXM2 172 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 TCTE3Q8IZS6 198 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 OR10J6PQ8NGY7 276 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 RAB24Q969Q5 203 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 AAMDCQ9H7C9 122 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 X6R8D5 127 aa7.45□□□□□ -1.22
HDAC6-222ENST00000478095 IGHV4-28A0A0C4DH34 117 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 A0A0D9SG52 128 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 KANTRA0A1W2PQU2 76 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 ZNF705EA8MWA4 302 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-222ENST00000478095 BOLA2-SMG1P6H3BVE0 249 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 PFDN1O60925 122 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 MBP02144 154 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 ARL14EPLP0DKL9 152 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 CD300CQ08708 224 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 ERCC8Q13216 396 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 PQLC2Q6ZP29 291 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 Q8NAQ8 132 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 MRPL53Q96EL3 112 aaKnown RBP7.44□□□□□ -1.22
HDAC6-222ENST00000478095 ZNF471Q9BX82 626 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-222ENST00000478095 Q9H3A6 140 aa7.44□□□□□ -1.22
HDAC6-222ENST00000478095 AGRNO00468 2067 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 IGKV2-40A0A087WW87 121 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-222ENST00000478095 J3KRW8 73 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 CRXO43186 299 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-222ENST00000478095 INSP01308 110 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 IGKV2D-40P01614 121 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-222ENST00000478095 STAG3L2P0CL84 134 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 STAG3L3P0CL85 134 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 ZNF726P1Q15940 193 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 AKR1C8PQ5T2L2 129 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 ZNF705AQ6ZN79 300 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-222ENST00000478095 TMUB2Q71RG4 321 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 IQCF2Q8IXL9 164 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 C1orf158Q8N1D5 194 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 HYLS1Q96M11 299 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-222ENST00000478095 RPH3ALQ9UNE2 315 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 PRELID1Q9Y255 219 aa7.43□□□□□ -1.22
HDAC6-222ENST00000478095 NPIPB6E9PJ23 425 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 C1QBP02746 253 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 AMBPP02760 352 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 RBMY1A1P0DJD3 496 aaKnown RBP7.42□□□□□ -1.22
HDAC6-222ENST00000478095 RBMY1CP0DJD4 496 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 CT45A10P0DMU9 189 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 MIFP14174 115 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 GCHFRP30047 84 aa7.42□□□□□ -1.22
HDAC6-222ENST00000478095 PMS2P11Q13670 270 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms