RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 AMN1Q8IY45 258 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 LINC00311Q8N616 119 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 C11orf44Q8N8P7 122 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 C18orf32Q8TCD1 76 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 TMEM160Q9NX00 188 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 KAAG1Q9UBP8 84 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 EXPH5Q8NEV8 1989 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 TRAV8-6A0A0B4J262 113 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 A8MWP6 167 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 D6R8Y8 96 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 ATP6V0E1O15342 81 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 LBHQ53QV2 105 aaPredicted RBP8.78□□□□□ -1
COL27A1-204ENST00000477421 UNQ6494/PRO21346Q6UXR6 183 aa8.78□□□□□ -1
COL27A1-204ENST00000477421 RAB9AP51151 201 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 Q86TA4 180 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 C11orf52Q96A22 123 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 ATG2AQ2TAZ0 1938 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 BOD1L1Q8NFC6 3051 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 HAX1O00165 279 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 TDGF1P3P51864 188 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 RPS20P60866 119 aaKnown RBP8.77□□□□□ -1.01
COL27A1-204ENST00000477421 TMEM97Q5BJF2 176 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 LCNL1Q6ZST4 164 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 C8orf49Q96NF6 230 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 SPTBN5Q9NRC6 3674 aaKnown RBP8.77□□□□□ -1.01
COL27A1-204ENST00000477421 TMEM213A2RRL7 107 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 TOMM40O96008 361 aa8.77□□□□□ -1.01
COL27A1-204ENST00000477421 RNASE4P34096 147 aaKnown RBP8.77□□□□□ -1.01
COL27A1-204ENST00000477421 YPEL3P61236 119 aaPredicted RBP8.77□□□□□ -1.01
COL27A1-204ENST00000477421 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 RPL24P83731 157 aaKnown RBP8.76□□□□□ -1.01
COL27A1-204ENST00000477421 PAX8Q06710 450 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 TRAV41A0A0B4J266 112 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 M0R1W7 72 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 NPFFO15130 113 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 CACNG7P62955 275 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 TDRG1Q3Y452 100 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 RNF5Q99942 180 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 PYGO2Q9BRQ0 406 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 FN1P02751 2386 aaKnown RBP8.76□□□□□ -1.01
COL27A1-204ENST00000477421 NDUFS8O00217 210 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 ID1P41134 155 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 PSG3Q16557 428 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 TMEM75Q8N9X5 138 aa8.76□□□□□ -1.01
COL27A1-204ENST00000477421 SOX21Q9Y651 276 aaPredicted RBP8.76□□□□□ -1.01
COL27A1-204ENST00000477421 TRAV9-2A0A087WT02 112 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 H3BVH4 76 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 SH2D1AO60880 128 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 SRSF9Q13242 221 aaKnown RBP eCLIP8.75□□□□□ -1.012e-6■□□□□ 10.3
COL27A1-204ENST00000477421 EBLN2Q6P2I7 272 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 DYNLRB2Q8TF09 96 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 PKD1L2Q7Z442 2459 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
COL27A1-204ENST00000477421 TRBV19A0A075B6N1 114 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 FAM120AOSQ5T036 256 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 FAM159AQ6UWV7 190 aa8.75□□□□□ -1.01
COL27A1-204ENST00000477421 IGKV1-17P01599 117 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
COL27A1-204ENST00000477421 C12orf54Q6X4T0 127 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 FOXC2Q99958 501 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 ZNF462Q96JM2 2506 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 CR1LQ2VPA4 569 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 MINOS1Q5TGZ0 78 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 MINOS1-NBL1R4GNA1 71 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 LEPP41159 167 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 ZNF491Q8N8L2 437 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 SNHG12Q9BXW3 62 aa8.74□□□□□ -1.01
COL27A1-204ENST00000477421 Q6AWC8 147 aa8.73□□□□□ -1.01
COL27A1-204ENST00000477421 ZNF503Q96F45 646 aa8.73□□□□□ -1.01
COL27A1-204ENST00000477421 NAA38Q9BRA0 125 aaKnown RBP8.73□□□□□ -1.01
COL27A1-204ENST00000477421 DGAT2L7PQ6IED9 249 aa8.73□□□□□ -1.01
COL27A1-204ENST00000477421 IFI27P40305 119 aaPredicted RBP8.73□□□□□ -1.01
COL27A1-204ENST00000477421 Q0VG73 95 aa8.73□□□□□ -1.01
COL27A1-204ENST00000477421 ZC2HC1AQ96GY0 325 aa8.73□□□□□ -1.01
COL27A1-204ENST00000477421 IGLV1-47P01700 117 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 Q1RN00 199 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 THAP8Q8NA92 274 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 IGLV2-23P01705 113 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 ADORA2A-AS1P86434 159 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 ZNF56Q15929 161 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 TMEM249Q2WGJ8 235 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 SIGLEC15Q6ZMC9 328 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 ACANP16112 2415 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 A6NDN8 102 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 SPRY2O43597 315 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 SCGB1C2P0DMR2 95 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 MOB4Q9Y3A3 225 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 DSCAML1Q8TD84 2053 aa8.72□□□□□ -1.01
COL27A1-204ENST00000477421 A0A0G2JLM5 398 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 SMIM27A0A1W2PRY6 76 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 ZNF688P0C7X2 276 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 SLC50A1Q9BRV3 221 aa8.71□□□□□ -1.01
COL27A1-204ENST00000477421 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.01
COL27A1-204ENST00000477421 NPFFR1Q9GZQ6 430 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms