RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SCGB1C1Q8TD33 95 aa8.97□□□□□ -0.97
APTX-220ENST00000476858 PHYHIPLQ96FC7 376 aa8.97□□□□□ -0.97
APTX-220ENST00000476858 TMEM14CQ9P0S9 112 aa8.97□□□□□ -0.97
APTX-220ENST00000476858 CELA1Q9UNI1 258 aa8.97□□□□□ -0.97
APTX-220ENST00000476858 FUT9Q9Y231 359 aa8.97□□□□□ -0.97
APTX-220ENST00000476858 S100A7P31151 101 aa8.96□□□□□ -0.98
APTX-220ENST00000476858 ERCC8Q13216 396 aa8.96□□□□□ -0.98
APTX-220ENST00000476858 ZNF705AQ6ZN79 300 aaPredicted RBP8.96□□□□□ -0.98
APTX-220ENST00000476858 ZNF767PQ75MW2 155 aa8.96□□□□□ -0.98
APTX-220ENST00000476858 CLUHP3Q96NS8 147 aa8.96□□□□□ -0.98
APTX-220ENST00000476858 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
APTX-220ENST00000476858 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.98
APTX-220ENST00000476858 C17orf112F2Z3M2 114 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 ARPC5O15511 151 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 HIST1H1EP10412 219 aaKnown RBP8.95□□□□□ -0.98
APTX-220ENST00000476858 CXCL2P19875 107 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 FAM122CQ6P4D5 195 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 SLC50A1Q9BRV3 221 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 PAXXQ9BUH6 204 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 OR51M1Q9H341 326 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 SACSQ9NZJ4 4579 aa8.95□□□□□ -0.98
APTX-220ENST00000476858 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
APTX-220ENST00000476858 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
APTX-220ENST00000476858 NBEAP1P0C6P0 100 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 CT45A10P0DMU9 189 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 ICAM4Q14773 271 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 SAMD13Q5VXD3 122 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 Q6ZNX1 250 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 Q6ZQT7 251 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 S100A7AQ86SG5 101 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 RPP25LQ8N5L8 163 aaKnown RBP8.94□□□□□ -0.98
APTX-220ENST00000476858 RNF141Q8WVD5 230 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 ASB13Q8WXK3 278 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 ST6GAL2Q96JF0 529 aa8.94□□□□□ -0.98
APTX-220ENST00000476858 MRPL32Q9BYC8 188 aaKnown RBP8.94□□□□□ -0.98
APTX-220ENST00000476858 C11orf68Q9H3H3 251 aaKnown RBP8.94□□□□□ -0.98
APTX-220ENST00000476858 ZNF705GA8MUZ8 300 aaPredicted RBP8.93□□□□□ -0.98
APTX-220ENST00000476858 BOLA2-SMG1P6H3BVE0 249 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 J3KRW8 73 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 OR7C2O60412 319 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 DUSP14O95147 198 aaKnown RBP8.93□□□□□ -0.98
APTX-220ENST00000476858 NUTF2P61970 127 aaKnown RBP8.93□□□□□ -0.98
APTX-220ENST00000476858 RHOBP62745 196 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 CD300CQ08708 224 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 ZNF726P1Q15940 193 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 KCNIP2Q9NS61 270 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 TIMM9Q9Y5J7 89 aa8.93□□□□□ -0.98
APTX-220ENST00000476858 hCG_2014768A0A024R1R8 64 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 CXorf65A6NEN9 183 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 NPIPB6E9PJ23 425 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 ZNF253O75346 499 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 AZU1P20160 251 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 M6PRP20645 277 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 EMP1P54849 157 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 UBE2L3P68036 154 aaKnown RBP8.92□□□□□ -0.98
APTX-220ENST00000476858 GUK1Q16774 197 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 TMEM41BQ5BJD5 291 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 INO80EQ8NBZ0 244 aaPredicted RBP8.92□□□□□ -0.98
APTX-220ENST00000476858 OR10G4Q8NGN3 311 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 OR10G9Q8NGN4 311 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 OR10G7Q8NGN6 311 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 OR2G3Q8NGZ4 309 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 IGF2BP2-AS1Q96M15 143 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 LYSTQ99698 3801 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 VGLL1Q99990 258 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 C1QTNF4Q9BXJ3 329 aa8.92□□□□□ -0.98
APTX-220ENST00000476858 A0A1B0GVG6 124 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 MIFP14174 115 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 RANP62826 216 aaKnown RBP8.91□□□□□ -0.98
APTX-220ENST00000476858 ACOT6Q3I5F7 207 aaPredicted RBP8.91□□□□□ -0.98
APTX-220ENST00000476858 PRR9Q5T870 116 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 C11orf45Q8TAV5 145 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 AGPAT4-IT1Q9H0P7 198 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 RNF24Q9Y225 148 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 RYR2Q92736 4967 aa8.91□□□□□ -0.98
APTX-220ENST00000476858 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 ARL14EPLP0DKL9 152 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 PDE6HQ13956 83 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 ZNF266Q14584 549 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 C12orf74Q32Q52 190 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 GFI1BQ5VTD9 330 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 Q6ZTC4 211 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 KCNRGQ8N5I3 272 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 Q8TAT8 98 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 PHLDA1Q8WV24 401 aaPredicted RBP8.9□□□□□ -0.98
APTX-220ENST00000476858 RAB24Q969Q5 203 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 PSMG3Q9BT73 122 aaPredicted RBP8.9□□□□□ -0.98
APTX-220ENST00000476858 Q9H3A6 140 aa8.9□□□□□ -0.98
APTX-220ENST00000476858 CDC34P49427 236 aaPredicted RBP8.89□□□□□ -0.99
APTX-220ENST00000476858 GNG5P63218 68 aa8.89□□□□□ -0.99
APTX-220ENST00000476858 KHDC3LQ587J8 217 aa8.89□□□□□ -0.99
APTX-220ENST00000476858 OR10J6PQ8NGY7 276 aa8.89□□□□□ -0.99
APTX-220ENST00000476858 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
APTX-220ENST00000476858 NEU1Q99519 415 aa8.89□□□□□ -0.99
APTX-220ENST00000476858 DNAH1Q9P2D7 4330 aa8.89□□□□□ -0.99
APTX-220ENST00000476858 LOC102723971A0A1B0GUV8 181 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 INSP01308 110 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 STAG3L2P0CL84 134 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 STAG3L3P0CL85 134 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 FHITP49789 147 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms