RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 BAP18Q8IXM2 172 aa8.15□□□□□ -1.1
NUDCD3-206ENST00000475952 PPP1R1CQ8WVI7 109 aa8.15□□□□□ -1.1
NUDCD3-206ENST00000475952 NIPSNAP3BQ9BS92 247 aa8.15□□□□□ -1.1
NUDCD3-206ENST00000475952 OR5AC2Q9NZP5 309 aa8.15□□□□□ -1.1
NUDCD3-206ENST00000475952 DKK2Q9UBU2 259 aa8.15□□□□□ -1.1
NUDCD3-206ENST00000475952 YTHDF2Q9Y5A9 579 aaKnown RBP8.15□□□□□ -1.1
NUDCD3-206ENST00000475952 PKD1P98161 4303 aa8.15□□□□□ -1.11
NUDCD3-206ENST00000475952 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 TRAV12-2A0A075B6T6 113 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 H3BTX0 84 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 SLC17A3O00476 420 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 CDKN1BP46527 198 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 H2BFSP57053 126 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 CLINT1Q14677 625 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 NDUFAF3Q9BU61 184 aa8.14□□□□□ -1.11
NUDCD3-206ENST00000475952 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 C17orf112F2Z3M2 114 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 H0YIZ8 118 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 H3BQ15 152 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 ZNF253O75346 499 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 TSPOP30536 169 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 OXA1LQ15070 435 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 THAP6Q8TBB0 222 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 SAT2Q96F10 170 aaPredicted RBP8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
NUDCD3-206ENST00000475952 MPC2O95563 127 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 PRB4P10163 310 aaPredicted RBP8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 DAD1P61803 113 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 PDE6HQ13956 83 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 FAM210BQ96KR6 192 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 LINC01587Q99440 93 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 C20orf144Q9BQM9 153 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 WDR61Q9GZS3 305 aaKnown RBP8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 ZNF586Q9NXT0 402 aa8.12□□□□□ -1.11
NUDCD3-206ENST00000475952 LYRM9A8MSI8 78 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 ZNF705GA8MUZ8 300 aaPredicted RBP8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 P0DMU3 169 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 HIST1H1EP10412 219 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 TAS2R60P59551 318 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 GCSAMLQ5JQS6 135 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 MRPL53Q96EL3 112 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 C16orf74Q96GX8 76 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 ODF3Q96PU9 254 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 ATP5SQ99766 215 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 MRPL32Q9BYC8 188 aaKnown RBP8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 AAMDCQ9H7C9 122 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 PRELID1Q9Y255 219 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
NUDCD3-206ENST00000475952 TRBV19A0A075B6N1 114 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 H7BYZ3 331 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 PTTG1O95997 202 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 PYYP10082 97 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 HTN3P15516 51 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 RPL12P30050 165 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 TMEM263Q8WUH6 116 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 SLC25A2Q9BXI2 301 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 HSPB11Q9Y547 144 aa8.1□□□□□ -1.11
NUDCD3-206ENST00000475952 NPIPB6E9PJ23 425 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 IFNA5P01569 189 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 HTN1P15515 57 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 LEPP41159 167 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 GFI1BQ5VTD9 330 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 SCGB1C1Q8TD33 95 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 BLNKQ8WV28 456 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 MBD2Q9UBB5 411 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 FUT9Q9Y231 359 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 ALG5Q9Y673 324 aa8.09□□□□□ -1.11
NUDCD3-206ENST00000475952 HSPG2P98160 4391 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 M0R3E3 92 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 NDUFB4O95168 129 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 PRM2P04554 102 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 AZU1P20160 251 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 ZNF493Q6ZR52 646 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 CCDC28AQ8IWP9 274 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 FAM167A-AS1Q96KT0 104 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 PARD6GQ9BYG4 376 aaPredicted RBP8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 SMIM3Q9BZL3 60 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 OR51M1Q9H341 326 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 PLA2G2EQ9NZK7 142 aa8.08□□□□□ -1.12
NUDCD3-206ENST00000475952 PLAC8L1A1L4L8 177 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 J3KRW8 73 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 OR7C2O60412 319 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 NBEAP1P0C6P0 100 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 CT45A10P0DMU9 189 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 DEFB130BP0DP73 79 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 DEFB130AP0DP74 79 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 FFAR4Q5NUL3 377 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 EXOC3-AS1Q8N2X6 119 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 RNASE8Q8TDE3 154 aaKnown RBP8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 PAXXQ9BUH6 204 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 BOLA1Q9Y3E2 137 aa8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 TIMM8BQ9Y5J9 83 aaPredicted RBP8.07□□□□□ -1.12
NUDCD3-206ENST00000475952 HERC1Q15751 4861 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms