RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 SLC25A21Q9BQT8 299 aaPredicted RBP8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 ZNF355PQ9NSJ1 428 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 WI2-2373I1.2A0A1W2PRP0 233 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 A6NDN8 102 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 J3KT08 172 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 OVOL1O14753 267 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 PPYP01298 95 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 HSPB1P04792 205 aaKnown RBP8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 CT45A10P0DMU9 189 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 TSPOP30536 169 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 KLF9Q13886 244 aaPredicted RBP8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 DEFB121Q5J5C9 76 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 ASPHD1Q5U4P2 390 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 SPATA31B1PQ5VZV4 182 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 AMMECR1LQ6DCA0 310 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 FAM219AQ8IW50 185 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 MMD2Q8IY49 270 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 OR4X1Q8NH49 305 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 THYN1Q9P016 225 aa8.88□□□□□ -0.99
HLA-DOB-208ENST00000475235 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 PAGE4O60829 102 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 IGHV3-11P01762 117 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 CXCL1P09341 107 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 SAA1P0DJI8 122 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 KIR2DS2P43631 304 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 P2RY1P47900 373 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 CAMPP49913 170 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 RPL30P62888 115 aaKnown RBP8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 EIF4EBP1Q13541 118 aaPredicted RBP8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 AADACL3Q5VUY0 350 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 C11orf87Q6NUJ2 197 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 ZNF429Q86V71 674 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 SECTM1Q8WVN6 248 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 SRSF12Q8WXF0 261 aaKnown RBP8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 PYGO2Q9BRQ0 406 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 COMMD9Q9P000 198 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
HLA-DOB-208ENST00000475235 NOTCH3Q9UM47 2321 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 IGHV4OR15-8A0A075B7B6 117 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 A0A087WW49 117 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 MSGN1A6NI15 193 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 HYPMO75409 117 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 PTHLHP12272 177 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 CATR1Q13166 79 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 MRGPRG-AS1Q2M3A8 158 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 SOHLH1Q5JUK2 328 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 ZNF343Q6P1L6 599 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 DLX4Q92988 240 aaPredicted RBP8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 USMG5Q96IX5 58 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 WDR61Q9GZS3 305 aaKnown RBP8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 CCL28Q9NRJ3 127 aa8.86□□□□□ -0.99
HLA-DOB-208ENST00000475235 GABARAPH6UMI1 98 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 K7EP34 96 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 TAAR5O14804 337 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 HRASP01112 189 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 OR9G9P0C7N8 305 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 PRSS3P35030 304 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 ECI1P42126 302 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 SLURP1P55000 103 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 TAS2R46P59540 309 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 HERV-K104P61576 105 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 PSG9Q00887 426 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 ADAD2Q8NCV1 583 aaKnown RBP8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 ANAPC10Q9UM13 185 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 ZNF256Q9Y2P7 627 aaPredicted RBP8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 TGP01266 2768 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 TINCRA0A1B0GVN0 87 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 MEIS3P1A6NDR6 274 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 NPIPB5A8MRT5 1133 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 KBTBD11O94819 623 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 FAM3BP58499 235 aaPredicted RBP8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 FXYD4P59646 89 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 YPEL3P61236 119 aaPredicted RBP8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 SLC25A42Q86VD7 318 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 TMEM167AQ8TBQ9 72 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 SPANXDQ9BXN6 97 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 EHFQ9NZC4 300 aa8.85□□□□□ -0.99
HLA-DOB-208ENST00000475235 TRAV14DV4A0A0A6YYC5 116 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 FAM223BA6NKX1 122 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 TNFSF12O43508 249 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 HRH1P35367 487 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 BRWD1-AS2P59051 145 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 CD69Q07108 199 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 FAM223AQ8IWN6 122 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 VKORC1L1Q8N0U8 176 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 SYT8Q8NBV8 401 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 OR5H2Q8NGV7 314 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 OR52I2Q8NH67 350 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 OR4A5Q8NH83 315 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 SGK494Q96LW2 274 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 OR4C12Q96R67 309 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 B9D2Q9BPU9 175 aa8.84□□□□□ -0.99
HLA-DOB-208ENST00000475235 NDUFB6O95139 128 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 REG1AP05451 166 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 EIF4EP06730 217 aaKnown RBP8.83□□□□□ -1
HLA-DOB-208ENST00000475235 APELAP0DMC3 54 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 ORM2P19652 201 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms