RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-206ENST00000474828 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
SCAF11-206ENST00000474828 TMUB2Q71RG4 321 aa12.33□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF738Q8NE65 137 aa12.33□□□□□ -0.44
SCAF11-206ENST00000474828 STOML3Q8TAV4 291 aa12.33□□□□□ -0.44
SCAF11-206ENST00000474828 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
SCAF11-206ENST00000474828 WWC2-AS2Q96NR7 200 aa12.33□□□□□ -0.44
SCAF11-206ENST00000474828 A0A1W2PPV4 95 aa12.32□□□□□ -0.44
SCAF11-206ENST00000474828 OR7C2O60412 319 aa12.32□□□□□ -0.44
SCAF11-206ENST00000474828 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
SCAF11-206ENST00000474828 CDC34P49427 236 aaPredicted RBP12.32□□□□□ -0.44
SCAF11-206ENST00000474828 ARL6IP6Q8N6S5 226 aa12.32□□□□□ -0.44
SCAF11-206ENST00000474828 hCG_2014768A0A024R1R8 64 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 KANTRA0A1W2PQU2 76 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-206ENST00000474828 PRAC2D3DTV9 90 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 OR10J4P0C629 311 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF726P1Q15940 193 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 FAM122CQ6P4D5 195 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF705AQ6ZN79 300 aaPredicted RBP12.31□□□□□ -0.44
SCAF11-206ENST00000474828 PHYHIPLQ96FC7 376 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 ODF3Q96PU9 254 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 PLA2G2EQ9NZK7 142 aa12.31□□□□□ -0.44
SCAF11-206ENST00000474828 NPIPB6E9PJ23 425 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 M0R3E3 92 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 AMBPP02760 352 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 UBE2L3P68036 154 aaKnown RBP12.3□□□□□ -0.44
SCAF11-206ENST00000474828 CD300CQ08708 224 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 BAP18Q8IXM2 172 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 OR4B1Q8NGF8 309 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-206ENST00000474828 SLC35B3Q9H1N7 401 aa12.3□□□□□ -0.44
SCAF11-206ENST00000474828 CRXO43186 299 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF705DP0CH99 300 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF705BP0CI00 300 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-206ENST00000474828 EIF5AP63241 154 aaKnown RBP12.29□□□□□ -0.44
SCAF11-206ENST00000474828 EXOC3-AS1Q8N2X6 119 aa12.29□□□□□ -0.44
SCAF11-206ENST00000474828 BLNKQ8WV28 456 aa12.29□□□□□ -0.44
SCAF11-206ENST00000474828 NEU1Q99519 415 aa12.29□□□□□ -0.44
SCAF11-206ENST00000474828 AAMDCQ9H7C9 122 aa12.29□□□□□ -0.44
SCAF11-206ENST00000474828 X6R8D5 127 aa12.29□□□□□ -0.44
SCAF11-206ENST00000474828 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 EIF3GO75821 320 aaKnown RBP eCLIP12.28□□□□□ -0.44
SCAF11-206ENST00000474828 ARL14EPLP0DKL9 152 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 ICAM4Q14773 271 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 C9orf47Q6ZRZ4 202 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 C9orf62Q8N4C0 152 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 FAM19A4Q96LR4 140 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 IGF2BP2-AS1Q96M15 143 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 RARRES2Q99969 163 aa12.28□□□□□ -0.44
SCAF11-206ENST00000474828 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-206ENST00000474828 C11orf68Q9H3H3 251 aaKnown RBP12.28□□□□□ -0.44
SCAF11-206ENST00000474828 BOLA2-SMG1P6H3BVE0 249 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 CXorf1O96002 111 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 IGKV3-20P01619 116 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 GCHFRP30047 84 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 HIST1H1AQ02539 215 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-206ENST00000474828 Q8NAQ8 132 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 OR11H2Q8NH07 326 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 Q9H3A6 140 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 OTORQ9NRC9 128 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 XCL2Q9UBD3 114 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 CSMD3Q7Z407 3707 aa12.27□□□□□ -0.45
SCAF11-206ENST00000474828 RBAKDNA6NC62 111 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 PFDN1O60925 122 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 SLC25A5P05141 298 aaKnown RBP12.26□□□□□ -0.45
SCAF11-206ENST00000474828 TPT1P13693 172 aaKnown RBP12.26□□□□□ -0.45
SCAF11-206ENST00000474828 RANP62826 216 aaKnown RBP12.26□□□□□ -0.45
SCAF11-206ENST00000474828 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 DPPA3Q6W0C5 159 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 C1orf158Q8N1D5 194 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 OR10J6PQ8NGY7 276 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 TMEM167BQ9NRX6 74 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
SCAF11-206ENST00000474828 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 HMGB3O15347 200 aaKnown RBP12.25□□□□□ -0.45
SCAF11-206ENST00000474828 NMBP08949 121 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 CT45A10P0DMU9 189 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 MIFP14174 115 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 MBD3L1Q8WWY6 194 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 LINC00477Q96M19 166 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
SCAF11-206ENST00000474828 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
SCAF11-206ENST00000474828 CRISP2P16562 243 aa12.24□□□□□ -0.45
SCAF11-206ENST00000474828 SPINK13Q1W4C9 94 aa12.24□□□□□ -0.45
SCAF11-206ENST00000474828 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
SCAF11-206ENST00000474828 SLC51BQ86UW2 128 aa12.24□□□□□ -0.45
SCAF11-206ENST00000474828 C20orf144Q9BQM9 153 aa12.24□□□□□ -0.45
SCAF11-206ENST00000474828 A0A1W2PRE2 83 aa12.23□□□□□ -0.45
SCAF11-206ENST00000474828 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
SCAF11-206ENST00000474828 M0R2Z0 102 aa12.23□□□□□ -0.45
SCAF11-206ENST00000474828 CDKN1BP46527 198 aa12.23□□□□□ -0.45
SCAF11-206ENST00000474828 FXYD7P58549 80 aa12.23□□□□□ -0.45
SCAF11-206ENST00000474828 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
SCAF11-206ENST00000474828 A0A0J9YWU9 116 aa12.22□□□□□ -0.45
SCAF11-206ENST00000474828 KLLNB2CW77 178 aa12.22□□□□□ -0.45
SCAF11-206ENST00000474828 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms