RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LINC00482Q8N8I6 264 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 OR10J6PQ8NGY7 276 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 MRPL53Q96EL3 112 aaKnown RBP7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 FMC1Q96HJ9 113 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 SPAG8Q99932 426 aaPredicted RBP7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 PPP1R14DQ9NXH3 145 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 SELENOKQ9Y6D0 94 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 SMAD5-AS1Q9Y6J3 95 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 TRAV2A0A0B4J234 112 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 TSPAN4O14817 238 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 EDN2P20800 178 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 GNG4P50150 75 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 CMC4P56277 68 aaPredicted RBP7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 GNG5P63218 68 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 PSG3Q16557 428 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 TMEM78Q5T7P6 136 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 EBLN2Q6P2I7 272 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 GOLT1AQ6ZVE7 132 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 ARL6IP6Q8N6S5 226 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 C11orf52Q96A22 123 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 SEC11CQ9BY50 192 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 PARLQ9H300 379 aa7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 TEP1Q99973 2627 aaKnown RBP7.77□□□□□ -1.17
PRPF38A-202ENST00000474048 M0R036 132 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 APOC3P02656 99 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 TCRAP04437 139 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 ZNF688P0C7X2 276 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 DEFB114Q30KQ6 69 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 CD300EQ496F6 205 aaPredicted RBP7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 PSMG4Q5JS54 123 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 TMEM61Q8N0U2 210 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 SVBPQ8N300 66 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 BIN3Q9NQY0 253 aa7.76□□□□□ -1.17
PRPF38A-202ENST00000474048 NF1P21359 2839 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 DIRC3C9JPN6 131 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 M0R3E3 92 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 SNAPINO95295 136 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 RPL35P42766 123 aaKnown RBP7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 RIPPLY3P57055 190 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 TAS2R60P59551 318 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 PNRC1Q12796 327 aaPredicted RBP7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 TMEM241Q24JQ0 296 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 FAM90A2PQ658T7 463 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 IGFL4Q6B9Z1 124 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 GTSCR1Q86UQ5 136 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 CCDC28AQ8IWP9 274 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 TVP23CQ96ET8 276 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 ZMAT5Q9UDW3 170 aaKnown RBP7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 NAT8Q9UHE5 227 aa7.75□□□□□ -1.17
PRPF38A-202ENST00000474048 CUBNO60494 3623 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 RBAKDNA6NC62 111 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 K7EQG2 157 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 DUSP14O95147 198 aaKnown RBP7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 FLI1Q01543 452 aaPredicted RBP7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 ADIRFQ15847 76 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 CENPWQ5EE01 88 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 PRNTQ86SH4 94 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 DCANP1Q8TF63 244 aa7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 SETD2Q9BYW2 2564 aaPredicted RBP7.74□□□□□ -1.17
PRPF38A-202ENST00000474048 WNK1Q9H4A3 2382 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 IGKV2-40A0A087WW87 121 aaPredicted RBP7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 TRAV34A0A0B4J273 112 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 ZNF705FA8MVS1 300 aaPredicted RBP7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 OR11H12B2RN74 326 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 C9JCJ5 164 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 C9JQL5 133 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 IGKV2D-40P01614 121 aaPredicted RBP7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 IGLV1-51P01701 117 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 TMEM183BQ1AE95 376 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 SAPCD1Q5SSQ6 148 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 ADAMTSL5Q6ZMM2 481 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 BAGE2Q86Y30 109 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 C2CD4CQ8TF44 421 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 DERL1Q9BUN8 251 aa7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 NIPBLQ6KC79 2804 aaeCLIP7.73□□□□□ -1.17
PRPF38A-202ENST00000474048 TRAV8-2A0A0B4J237 113 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 SOCS3O14543 225 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 PRR31Q5SQ13 230 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 Q86TA4 180 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 LURAP1LQ8IV03 231 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 DAZAP1Q96EP5 407 aaKnown RBP7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 SGK494Q96LW2 274 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 PSG8Q9UQ74 426 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 ZFP30Q9Y2G7 519 aa7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
PRPF38A-202ENST00000474048 B4DEV8 164 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 ZNF138P52744 262 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 DEFB131AP59861 70 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 PRR27Q6MZM9 219 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 FOXI2Q6ZQN5 318 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 C15orf54Q8N8G6 183 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 OR4B1Q8NGF8 309 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms