RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 MBD2Q9UBB5 411 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
SHROOM3-204ENST00000473602 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 SLC17A3O00476 420 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 RHOBP62745 196 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 PDE6HQ13956 83 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 Q6ZNX1 250 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 MRPL53Q96EL3 112 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 FAM210AQ96ND0 272 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 TMEM208Q9BTX3 173 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 MRPL32Q9BYC8 188 aaKnown RBP9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 PPP1R14DQ9NXH3 145 aa9.3□□□□□ -0.92
SHROOM3-204ENST00000473602 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 M0R2Z0 102 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 CRXO43186 299 aaPredicted RBP9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 IFNA5P01569 189 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 SNRPCP09234 159 aaKnown RBP9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 SPART-AS1P0CW21 52 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 HIST1H1EP10412 219 aaKnown RBP9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 RRN3P1Q2M238 152 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 Q6ZTC4 211 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 TMEM256Q8N2U0 113 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 ASB13Q8WXK3 278 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 PARD6GQ9BYG4 376 aaPredicted RBP9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 MED28Q9H204 178 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 CELA1Q9UNI1 258 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 ABCA13Q86UQ4 5058 aa9.29□□□□□ -0.92
SHROOM3-204ENST00000473602 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 H3BTX0 84 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 CDKN1BP46527 198 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 C12orf74Q32Q52 190 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 GCSAMLQ5JQS6 135 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 SCGB1C1Q8TD33 95 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 C20orf144Q9BQM9 153 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 PRELID1Q9Y255 219 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 DNAH11Q96DT5 4516 aa9.28□□□□□ -0.92
SHROOM3-204ENST00000473602 TSPOP30536 169 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 ODF3Q96PU9 254 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 AAMDCQ9H7C9 122 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 FUT9Q9Y231 359 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
SHROOM3-204ENST00000473602 NDUFB4O95168 129 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 PYYP10082 97 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 EMP1P54849 157 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 OXA1LQ15070 435 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 FCN2Q15485 313 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 MIR17HGQ75NE6 70 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 FAM167A-AS1Q96KT0 104 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 SMIM3Q9BZL3 60 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 OR51M1Q9H341 326 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 DKK2Q9UBU2 259 aa9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 YTHDF2Q9Y5A9 579 aaKnown RBP9.26□□□□□ -0.93
SHROOM3-204ENST00000473602 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 IGLL5B9A064 214 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 NPIPB6E9PJ23 425 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 NBEAP1P0C6P0 100 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 FAM222AQ5U5X8 452 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 AQP10Q96PS8 301 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 NIPSNAP3BQ9BS92 247 aa9.25□□□□□ -0.93
SHROOM3-204ENST00000473602 TAS2R45P59539 299 aa9.24□□□□□ -0.93
SHROOM3-204ENST00000473602 TAS2R60P59551 318 aa9.24□□□□□ -0.93
SHROOM3-204ENST00000473602 ZNF266Q14584 549 aa9.24□□□□□ -0.93
SHROOM3-204ENST00000473602 BLNKQ8WV28 456 aa9.24□□□□□ -0.93
SHROOM3-204ENST00000473602 PAXXQ9BUH6 204 aa9.24□□□□□ -0.93
SHROOM3-204ENST00000473602 APLNQ9ULZ1 77 aa9.24□□□□□ -0.93
SHROOM3-204ENST00000473602 IGHV4-4A0A075B6R2 117 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 ZNF705GA8MUZ8 300 aaPredicted RBP9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 H7BYZ3 331 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 M0R3E3 92 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 OR7C2O60412 319 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 MED14OSP0DP75 135 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 LEPP41159 167 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 ACOT6Q3I5F7 207 aaPredicted RBP9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 KHDC3LQ587J8 217 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 ZNF767PQ75MW2 155 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 RNF141Q8WVD5 230 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 FXYD5Q96DB9 178 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 FAM210BQ96KR6 192 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 LINC01587Q99440 93 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 WFDC1Q9HC57 220 aa9.23□□□□□ -0.93
SHROOM3-204ENST00000473602 OR10J4P0C629 311 aa9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 PRB4P10163 310 aaPredicted RBP9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 M6PRP20645 277 aa9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 ICAM4Q14773 271 aa9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 ZNF493Q6ZR52 646 aa9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 LYPD1Q8N2G4 141 aa9.22□□□□□ -0.93
SHROOM3-204ENST00000473602 EXOC3-AS1Q8N2X6 119 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms