RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 YPEL3P61236 119 aaPredicted RBP4.87□□□□□ -1.63
HDAC1-205ENST00000472928 FOXE3Q13461 319 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 KHDC3LQ587J8 217 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 FAM78BQ5VT40 261 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 SPSB3Q6PJ21 355 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 CLEC19AQ6UXS0 136 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 MIR17HGQ75NE6 70 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 OR51G1Q8NGK1 321 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 MBD3L1Q8WWY6 194 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 USMG5Q96IX5 58 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 UHRF2Q96PU4 802 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 PRR25Q96S07 402 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 RNF2Q99496 336 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 CHRDL1Q9BU40 450 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 MRPL32Q9BYC8 188 aaKnown RBP4.87□□□□□ -1.63
HDAC1-205ENST00000472928 KLK15Q9H2R5 256 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 PRO1933Q9H354 126 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 GNG13Q9P2W3 67 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 FUT9Q9Y231 359 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 HIGD1AQ9Y241 93 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
HDAC1-205ENST00000472928 KIAA1109Q2LD37 5005 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 IGHV3OR16-8A0A075B7F1 116 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TRAV1-1A0A0B4J248 108 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 IGHV3-35A0A0C4DH35 117 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 A0A0G2JLM5 398 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 LOC102723971A0A1B0GUV8 181 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 M0R036 132 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 OR7C2O60412 319 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 BRI3O95415 125 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TRBV12-3P01733 135 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 CTSGP08311 255 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 BCL2P10415 239 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 RAB9AP51151 201 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TAS2R45P59539 299 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 UBE2L3P68036 154 aaKnown RBP4.86□□□□□ -1.63
HDAC1-205ENST00000472928 CCL20P78556 96 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 XP32Q5T750 250 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 MORN5Q5VZ52 161 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 ZFAND6Q6FIF0 208 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TEX38Q6PEX7 206 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 ADAMTSL5Q6ZMM2 481 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 OR4X2Q8NGF9 303 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 GATAD1Q8WUU5 269 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TMEM37Q8WXS4 190 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 ISOC2Q96AB3 205 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 RCHY1Q96PM5 261 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 OR5B12Q96R08 314 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TMEM208Q9BTX3 173 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
HDAC1-205ENST00000472928 SCRT1Q9BWW7 348 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 SLC25A2Q9BXI2 301 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 SLC35B3Q9H1N7 401 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 SEPSECSQ9HD40 501 aaKnown RBP4.86□□□□□ -1.63
HDAC1-205ENST00000472928 DNAJC4Q9NNZ3 241 aa4.86□□□□□ -1.63
HDAC1-205ENST00000472928 TECRQ9NZ01 308 aaKnown RBP4.86□□□□□ -1.63
HDAC1-205ENST00000472928 PUS1Q9Y606 427 aaKnown RBP eCLIP4.86□□□□□ -1.63
HDAC1-205ENST00000472928 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.85□□□□□ -1.63
HDAC1-205ENST00000472928 A0A1W2PPQ1 181 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 H3BRN7 92 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 BMPR1BO00238 502 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 PHOX2AO14813 284 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BKO60814 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 CXorf1O96002 111 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 CLEC3BP05452 202 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BJP06899 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 ELANEP08246 267 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 STAG3L2P0CL84 134 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 STAG3L3P0CL85 134 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 C8orf88P0DMB2 117 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BOP23527 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 G0S2P27469 103 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 GCHFRP30047 84 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BBP33778 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 AKR1C3P42330 323 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BDP58876 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 PLP1P60201 277 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 UBE2G2P60604 165 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BCP62807 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 GUK1Q16774 197 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST2H2BEQ16778 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF674Q2M3X9 581 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF506Q5JVG8 444 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.85□□□□□ -1.63
HDAC1-205ENST00000472928 LEMD1Q68G75 181 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 PATE2Q6UY27 113 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 C18orf65Q6ZTR6 163 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 LINC00305Q7Z4B0 112 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 SBSPONQ8IVN8 264 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 Q8WTZ3 238 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BHQ93079 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 PACRGQ96M98 296 aaPredicted RBP4.85□□□□□ -1.63
HDAC1-205ENST00000472928 ATP6V0BQ99437 205 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BNQ99877 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 HIST1H2BMQ99879 126 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 SNHG12Q9BXW3 62 aa4.85□□□□□ -1.63
HDAC1-205ENST00000472928 EIF5A2Q9GZV4 153 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms