RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 UQCC1Q9NVA1 299 aa10.76□□□□□ -0.69
VTI1A-203ENST00000472892 CBY3A6NI87 242 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 PRAC2D3DTV9 90 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 H3BTX0 84 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 H7BYZ3 331 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 H2AFB2P0C5Z0 115 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 HTN1P15515 57 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 PVALBP20472 110 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-203ENST00000472892 S100A11P31949 105 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 FAM3BP58499 235 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-203ENST00000472892 MIC13Q5XKP0 118 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 CHAC2Q8WUX2 184 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 LYRM2Q9NU23 88 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-203ENST00000472892 TIMM8BQ9Y5J9 83 aaPredicted RBP10.75□□□□□ -0.69
VTI1A-203ENST00000472892 PXMP4Q9Y6I8 212 aa10.75□□□□□ -0.69
VTI1A-203ENST00000472892 TRAV5A0A0B4J249 113 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 ATP5G1P05496 136 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 RPL29P47914 159 aaKnown RBP10.74□□□□□ -0.69
VTI1A-203ENST00000472892 ATP5G3P48201 142 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 SULT1A1P50225 295 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 KIR3DS1Q14943 382 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 GUK1Q16774 197 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 LINC00299Q6ZSB3 139 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 TMEM252Q8N6L7 170 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 OR1L4Q8NGR5 311 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 OR10J6PQ8NGY7 276 aa10.74□□□□□ -0.69
VTI1A-203ENST00000472892 RNASE8Q8TDE3 154 aaKnown RBP10.74□□□□□ -0.69
VTI1A-203ENST00000472892 PKD1P98161 4303 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 FAM240BA0A1B0GVZ2 78 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 IGSF23A1L1A6 192 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 F5H768 121 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
VTI1A-203ENST00000472892 PFDN5Q99471 154 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 SLC39A9Q9NUM3 307 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 PKHD1P08F94 4074 aa10.73□□□□□ -0.69
VTI1A-203ENST00000472892 ZNF253O75346 499 aa10.72□□□□□ -0.69
VTI1A-203ENST00000472892 S100A10P60903 97 aa10.72□□□□□ -0.69
VTI1A-203ENST00000472892 RAB32Q13637 225 aa10.72□□□□□ -0.69
VTI1A-203ENST00000472892 PARD6GQ9BYG4 376 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-203ENST00000472892 NOP10Q9NPE3 64 aaKnown RBP10.72□□□□□ -0.69
VTI1A-203ENST00000472892 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
VTI1A-203ENST00000472892 NPIPB6E9PJ23 425 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 CT45A10P0DMU9 189 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 HBG1P69891 147 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 HBG2P69892 147 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 ATP6V1FQ16864 119 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 SOHLH1Q5JUK2 328 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 C1orf134Q5TEV5 83 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 GFI1BQ5VTD9 330 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 MZT2BQ6NZ67 158 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 STX12Q86Y82 276 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 LINC00612Q8N6U2 182 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 ODF3Q96PU9 254 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 ATG101Q9BSB4 218 aa10.71□□□□□ -0.69
VTI1A-203ENST00000472892 DNAH11Q96DT5 4516 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 NACAE9PAV3 2078 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 DYNC1H1Q14204 4646 aaKnown RBP10.7□□□□□ -0.7
VTI1A-203ENST00000472892 TRBV19A0A075B6N1 114 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 UBE2L5PA0A1B0GUS4 154 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 NUDT3O95989 172 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 BAXQ07812 192 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 ASAH1Q13510 395 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 CCDC28AQ8IWP9 274 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
VTI1A-203ENST00000472892 TMEM14CQ9P0S9 112 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 PCLOQ9Y6V0 5065 aa10.7□□□□□ -0.7
VTI1A-203ENST00000472892 MPDU1O75352 247 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 MED14OSP0DP75 135 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 FGF7P21781 194 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 LEPP41159 167 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 RNF141Q8WVD5 230 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 S100ZQ8WXG8 99 aa10.69□□□□□ -0.7
VTI1A-203ENST00000472892 NDUFB4O95168 129 aa10.68□□□□□ -0.7
VTI1A-203ENST00000472892 HIST1H1EP10412 219 aaKnown RBP10.68□□□□□ -0.7
VTI1A-203ENST00000472892 CCL18P55774 89 aa10.68□□□□□ -0.7
VTI1A-203ENST00000472892 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
VTI1A-203ENST00000472892 GPN1Q9HCN4 374 aaPredicted RBP10.68□□□□□ -0.7
VTI1A-203ENST00000472892 TRAV12-3A0A0B4J271 114 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 J3KRW8 73 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 NHLH2Q02577 135 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 PDE6HQ13956 83 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 PYGO2Q9BRQ0 406 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 PRELID1Q9Y255 219 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 LINC00588Q9Y4M8 146 aa10.67□□□□□ -0.7
VTI1A-203ENST00000472892 NBDYA0A0U1RRE5 68 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 M0R3E3 92 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 RLN2P04090 185 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
VTI1A-203ENST00000472892 OR5I1Q13606 314 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 GCSAMLQ5JQS6 135 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 ZNF503Q96F45 646 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 TIMM9Q9Y5J7 89 aa10.66□□□□□ -0.7
VTI1A-203ENST00000472892 GAGE12BA1L429 117 aa10.65□□□□□ -0.7
VTI1A-203ENST00000472892 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
VTI1A-203ENST00000472892 KLLNB2CW77 178 aa10.65□□□□□ -0.7
VTI1A-203ENST00000472892 E5RGE8 158 aa10.65□□□□□ -0.7
VTI1A-203ENST00000472892 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms