RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 MARCH1Q8TCQ1 289 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 GLYATL2Q8WU03 294 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SMIM4Q8WVI0 70 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 GNPNAT1Q96EK6 184 aaPredicted RBP2.45□□□□□ -2.02
XRN1-209ENST00000472625 SLC50A1Q9BRV3 221 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SLC35B3Q9H1N7 401 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SDF2L1Q9HCN8 221 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 MRPL36Q9P0J6 103 aaKnown RBP2.45□□□□□ -2.02
XRN1-209ENST00000472625 EXTL2Q9UBQ6 330 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 RSL24D1Q9UHA3 163 aaKnown RBP2.45□□□□□ -2.02
XRN1-209ENST00000472625 MYCBP2O75592 4640 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 TRAV9-2A0A087WT02 112 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 A0A087X0K7 114 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 GAGE10A6NGK3 116 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 ZNF98A6NK75 572 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 EPM2AB3EWF7 344 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 PRAC2D3DTV9 90 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 WRBO00258 174 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 CTDSPLO15194 276 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 RGS5O15539 181 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 HPGDSO60760 199 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 NOL3O60936 208 aaKnown RBP2.44□□□□□ -2.02
XRN1-209ENST00000472625 IFNA5P01569 189 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 NCS1P62166 190 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 LSM3P62310 102 aaKnown RBP2.44□□□□□ -2.02
XRN1-209ENST00000472625 POLR2GP62487 172 aaKnown RBP eCLIP2.44□□□□□ -2.02
XRN1-209ENST00000472625 RHOBP62745 196 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 SLAQ13239 276 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 SPINK13Q1W4C9 94 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 GDF5OSQ5U4N7 250 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 SSX7Q7RTT5 188 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 SPATA12Q7Z6I5 190 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 ZNF546Q86UE3 836 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 CLVS1Q8IUQ0 354 aaPredicted RBP2.44□□□□□ -2.02
XRN1-209ENST00000472625 SELENOHQ8IZQ5 122 aaKnown RBP2.44□□□□□ -2.02
XRN1-209ENST00000472625 C1orf158Q8N1D5 194 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 C10orf126Q8N4M7 172 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 THAP8Q8NA92 274 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 OR11H7Q8NGC8 314 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 OR52I2Q8NH67 350 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 RXFP4Q8TDU9 374 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 FRZBQ92765 325 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 YIPF6Q96EC8 236 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 ODF3Q96PU9 254 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 LINC01587Q99440 93 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 BCL7BQ9BQE9 202 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 RSG1Q9BU20 258 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 FUNDC2Q9BWH2 189 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 Q9H8V8 135 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 SLC25A22Q9H936 323 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 SCRT2Q9NQ03 307 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 MCUBQ9NWR8 336 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 PAIP2BQ9ULR5 123 aaKnown RBP2.44□□□□□ -2.02
XRN1-209ENST00000472625 HIGD1AQ9Y241 93 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 MRPS16Q9Y3D3 137 aaKnown RBP2.44□□□□□ -2.02
XRN1-209ENST00000472625 FAT1Q14517 4588 aa2.44□□□□□ -2.02
XRN1-209ENST00000472625 TRAV26-1A0A087WT03 109 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 A0A0G2JRQ6 117 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 ANKRD65E5RJM6 399 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 FNDC10F2Z333 226 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 M0R2Z0 102 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 SYNGR2O43760 224 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 HYPMO75409 117 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 IL5P05113 134 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 ORM2P19652 201 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 LEPP41159 167 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 FXYD7P58549 80 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 UBE2MP61081 183 aaKnown RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 VBP1P61758 197 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 HIST1H1AQ02539 215 aaPredicted RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 ZNF90Q03938 601 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 FGL1Q08830 312 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 ARL16Q0P5N6 197 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 OR5I1Q13606 314 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 OR2F1Q13607 317 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 RAB31Q13636 194 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 IL18Q14116 193 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 GUK1Q16774 197 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 TMEM128Q5BJH2 165 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 AMTNQ6UX39 209 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 BPIFA4PQ86YQ2 179 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 LRTM2Q8N967 370 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 OR8A1Q8NGG7 326 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 LHFPL5Q8TAF8 219 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 RNASE8Q8TDE3 154 aaKnown RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 C18orf15Q96N68 181 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 SLC25A21Q9BQT8 299 aaPredicted RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 PYGO2Q9BRQ0 406 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 RTBDNQ9BSG5 229 aaPredicted RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 SHANK2-AS3Q9BTD1 123 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 SLC25A39Q9BZJ4 359 aaPredicted RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 RBKSQ9H477 322 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 CCDC59Q9P031 241 aaKnown RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 GPR132Q9UNW8 380 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 STRAPQ9Y3F4 350 aaKnown RBP2.43□□□□□ -2.02
XRN1-209ENST00000472625 LINC00588Q9Y4M8 146 aa2.43□□□□□ -2.02
XRN1-209ENST00000472625 PXMP4Q9Y6I8 212 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms