RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 OR5G3P0C626 314 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 AKAIN1P0CW23 69 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 CXCL2P19875 107 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 RPP30P78346 268 aaKnown RBP12.75□□□□□ -0.37
SORT1-203ENST00000471996 ZNF431Q8TF32 576 aaPredicted RBP12.75□□□□□ -0.37
SORT1-203ENST00000471996 ST6GAL2Q96JF0 529 aa12.75□□□□□ -0.37
SORT1-203ENST00000471996 SLIRPQ9GZT3 109 aaKnown RBP12.75□□□□□ -0.37
SORT1-203ENST00000471996 PSCAO43653 123 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 SPINK4O60575 86 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 CRYBA4P53673 196 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 SLAQ13239 276 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 Q8N814 137 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 CIB3Q96Q77 187 aaPredicted RBP12.74□□□□□ -0.37
SORT1-203ENST00000471996 PRRT1Q99946 306 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 SLC50A1Q9BRV3 221 aa12.74□□□□□ -0.37
SORT1-203ENST00000471996 PRAF2O60831 178 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 IGHV3-53P01767 116 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 CRYGDP07320 174 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 LINC00869P0C866 280 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 CT45A10P0DMU9 189 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 ANXA7P20073 488 aaKnown RBP12.73□□□□□ -0.37
SORT1-203ENST00000471996 LEPP41159 167 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 SRPXP78539 464 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 SCGB3A2Q96PL1 93 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 ODF3Q96PU9 254 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 HHLA3Q9XRX5 114 aa12.73□□□□□ -0.37
SORT1-203ENST00000471996 LINC00854A0A1B0GVQ3 168 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 ANKRD20A5PA0PJZ0 165 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 FABP12A6NFH5 140 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 MED6O75586 246 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 Q6ZSA8 131 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 OR51S1Q8NGJ8 323 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 MCFD2Q8NI22 146 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 SCP2D1Q9UJQ7 156 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 KLF12Q9Y4X4 402 aa12.72□□□□□ -0.37
SORT1-203ENST00000471996 SNRPCP09234 159 aaKnown RBP12.71□□□□□ -0.37
SORT1-203ENST00000471996 ANXA3P12429 323 aa12.71□□□□□ -0.37
SORT1-203ENST00000471996 TNFSF8P32971 234 aa12.71□□□□□ -0.37
SORT1-203ENST00000471996 TEPPQ6URK8 271 aa12.71□□□□□ -0.37
SORT1-203ENST00000471996 ZBTB8BQ8NAP8 495 aaPredicted RBP12.71□□□□□ -0.37
SORT1-203ENST00000471996 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
SORT1-203ENST00000471996 RNF24Q9Y225 148 aa12.71□□□□□ -0.37
SORT1-203ENST00000471996 WRBO00258 174 aa12.7□□□□□ -0.38
SORT1-203ENST00000471996 SELENOTP62341 195 aa12.7□□□□□ -0.38
SORT1-203ENST00000471996 FHL2Q14192 279 aa12.7□□□□□ -0.38
SORT1-203ENST00000471996 ANXA2RQ3ZCQ2 193 aa12.7□□□□□ -0.38
SORT1-203ENST00000471996 SPANXN5Q5MJ07 72 aa12.7□□□□□ -0.38
SORT1-203ENST00000471996 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
SORT1-203ENST00000471996 PIGBOS1A0A0B4J2F0 54 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 DUXBA0A1W2PPF3 345 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 SMCO3A2RU48 225 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 SYNGR2O43760 224 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 SLC25A6P12236 298 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 TCL1AP56279 114 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 EIF4E3Q8N5X7 224 aaKnown RBP12.69□□□□□ -0.38
SORT1-203ENST00000471996 VGLL1Q99990 258 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 ARL6Q9H0F7 186 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
SORT1-203ENST00000471996 K7EQD1 137 aa12.68□□□□□ -0.38
SORT1-203ENST00000471996 SLC17A3O00476 420 aa12.68□□□□□ -0.38
SORT1-203ENST00000471996 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
SORT1-203ENST00000471996 SRIP30626 198 aa12.68□□□□□ -0.38
SORT1-203ENST00000471996 C4orf46Q504U0 113 aa12.68□□□□□ -0.38
SORT1-203ENST00000471996 DEDD2Q8WXF8 326 aa12.68□□□□□ -0.38
SORT1-203ENST00000471996 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
SORT1-203ENST00000471996 H3BP45 60 aa12.67□□□□□ -0.38
SORT1-203ENST00000471996 H3BTX0 84 aa12.67□□□□□ -0.38
SORT1-203ENST00000471996 S100A5P33763 92 aa12.67□□□□□ -0.38
SORT1-203ENST00000471996 FAUP35544 74 aaKnown RBP12.67□□□□□ -0.38
SORT1-203ENST00000471996 KRTAP10-4P60372 401 aaPredicted RBP12.67□□□□□ -0.38
SORT1-203ENST00000471996 MRPL16Q9NX20 251 aaKnown RBP12.67□□□□□ -0.38
SORT1-203ENST00000471996 STRAPQ9Y3F4 350 aaKnown RBP12.67□□□□□ -0.38
SORT1-203ENST00000471996 PXMP4Q9Y6I8 212 aa12.67□□□□□ -0.38
SORT1-203ENST00000471996 C7orf71A4D174 169 aa12.66□□□□□ -0.38
SORT1-203ENST00000471996 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
SORT1-203ENST00000471996 E5RGE8 158 aa12.66□□□□□ -0.38
SORT1-203ENST00000471996 AP3S2P59780 193 aa12.66□□□□□ -0.38
SORT1-203ENST00000471996 IBA57Q5T440 356 aaKnown RBP12.66□□□□□ -0.38
SORT1-203ENST00000471996 BPIFA4PQ86YQ2 179 aa12.66□□□□□ -0.38
SORT1-203ENST00000471996 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
SORT1-203ENST00000471996 RCL1Q9Y2P8 373 aaKnown RBP12.66□□□□□ -0.38
SORT1-203ENST00000471996 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
SORT1-203ENST00000471996 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.38
SORT1-203ENST00000471996 SAT2Q96F10 170 aaPredicted RBP12.65□□□□□ -0.38
SORT1-203ENST00000471996 PKHD1L1Q86WI1 4243 aa12.64□□□□□ -0.39
SORT1-203ENST00000471996 KLLNB2CW77 178 aa12.64□□□□□ -0.39
SORT1-203ENST00000471996 K7EPK0 472 aa12.64□□□□□ -0.39
SORT1-203ENST00000471996 MCUBQ9NWR8 336 aa12.64□□□□□ -0.39
SORT1-203ENST00000471996 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 IBA57-AS1B1ANH7 110 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 IGLC2P0DOY2 106 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 GYPEP15421 78 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 CD300CQ08708 224 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 BTN1A1Q13410 526 aa12.63□□□□□ -0.39
SORT1-203ENST00000471996 PYDC2Q56P42 97 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms