RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ACTR3CQ9C0K3 210 aaPredicted RBP11.06□□□□□ -0.64
SNX13-205ENST00000471744 NDUFB4O95168 129 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 AMBPP02760 352 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 GIG44P09565 113 aaPredicted RBP11.05□□□□□ -0.64
SNX13-205ENST00000471744 OR10J4P0C629 311 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 C4BPBP20851 252 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 HLA-DMBP28068 263 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 CNN1P51911 297 aaKnown RBP11.05□□□□□ -0.64
SNX13-205ENST00000471744 TMUB2Q71RG4 321 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 RPP25LQ8N5L8 163 aaKnown RBP11.05□□□□□ -0.64
SNX13-205ENST00000471744 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
SNX13-205ENST00000471744 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
SNX13-205ENST00000471744 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 STAG3L2P0CL84 134 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
SNX13-205ENST00000471744 RAB24Q969Q5 203 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 RARRES2Q99969 163 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 PPP1R14DQ9NXH3 145 aa11.04□□□□□ -0.64
SNX13-205ENST00000471744 SEC11BP0C7V7 166 aa11.03□□□□□ -0.64
SNX13-205ENST00000471744 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
SNX13-205ENST00000471744 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
SNX13-205ENST00000471744 XCL2Q9UBD3 114 aa11.03□□□□□ -0.64
SNX13-205ENST00000471744 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 ZNF705FA8MVS1 300 aaPredicted RBP11.02□□□□□ -0.65
SNX13-205ENST00000471744 UMAD1C9J7I0 102 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 CXorf1O96002 111 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 ARL14EPLP0DKL9 152 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 TPT1P13693 172 aaKnown RBP11.02□□□□□ -0.65
SNX13-205ENST00000471744 CSN1S1P47710 185 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 ICAM4Q14773 271 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 FAM74A1Q5RGS3 127 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 AMTNQ6UX39 209 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 BAP18Q8IXM2 172 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 CSNK1G2-AS1Q8NCQ2 148 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 PHYHIPLQ96FC7 376 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 EDA2RQ9HAV5 297 aa11.02□□□□□ -0.65
SNX13-205ENST00000471744 HUWE1Q7Z6Z7 4374 aaKnown RBP11.02□□□□□ -0.65
SNX13-205ENST00000471744 BOLA2-SMG1P6H3BVE0 249 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
SNX13-205ENST00000471744 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
SNX13-205ENST00000471744 RANP62826 216 aaKnown RBP11.01□□□□□ -0.65
SNX13-205ENST00000471744 LGALSLQ3ZCW2 172 aaPredicted RBP11.01□□□□□ -0.65
SNX13-205ENST00000471744 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 STOML3Q8TAV4 291 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 SLC35B3Q9H1N7 401 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 Q9H3A6 140 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 TMEM167BQ9NRX6 74 aa11.01□□□□□ -0.65
SNX13-205ENST00000471744 A0A1B0GVG6 124 aa11□□□□□ -0.65
SNX13-205ENST00000471744 ZNF705EA8MWA4 302 aaPredicted RBP11□□□□□ -0.65
SNX13-205ENST00000471744 M0R3E3 92 aa11□□□□□ -0.65
SNX13-205ENST00000471744 HMGB3O15347 200 aaKnown RBP11□□□□□ -0.65
SNX13-205ENST00000471744 GCHFRP30047 84 aa11□□□□□ -0.65
SNX13-205ENST00000471744 TSPOP30536 169 aa11□□□□□ -0.65
SNX13-205ENST00000471744 EIF5AL1Q6IS14 154 aaKnown RBP11□□□□□ -0.65
SNX13-205ENST00000471744 ARL6IP6Q8N6S5 226 aa11□□□□□ -0.65
SNX13-205ENST00000471744 IL17DQ8TAD2 202 aa11□□□□□ -0.65
SNX13-205ENST00000471744 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
SNX13-205ENST00000471744 ODF3Q96PU9 254 aa11□□□□□ -0.65
SNX13-205ENST00000471744 OTORQ9NRC9 128 aa11□□□□□ -0.65
SNX13-205ENST00000471744 GOLT1BQ9Y3E0 138 aa11□□□□□ -0.65
SNX13-205ENST00000471744 PRAC2D3DTV9 90 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 NPIPB6E9PJ23 425 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 INSP01308 110 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 MIFP14174 115 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 FXYD7P58549 80 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 DPPA3Q6W0C5 159 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 SUN5Q8TC36 379 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 IGF2BP2-AS1Q96M15 143 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 LINC00477Q96M19 166 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 NEU1Q99519 415 aa10.99□□□□□ -0.65
SNX13-205ENST00000471744 C11orf68Q9H3H3 251 aaKnown RBP10.99□□□□□ -0.65
SNX13-205ENST00000471744 RBAKDNA6NC62 111 aa10.98□□□□□ -0.65
SNX13-205ENST00000471744 SMIM9A6NGZ8 99 aa10.98□□□□□ -0.65
SNX13-205ENST00000471744 EIF3GO75821 320 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX13-205ENST00000471744 CDKN1BP46527 198 aa10.98□□□□□ -0.65
SNX13-205ENST00000471744 SPINK13Q1W4C9 94 aa10.98□□□□□ -0.65
SNX13-205ENST00000471744 ZNF705AQ6ZN79 300 aaPredicted RBP10.98□□□□□ -0.65
SNX13-205ENST00000471744 SLC51BQ86UW2 128 aa10.98□□□□□ -0.65
SNX13-205ENST00000471744 CMTM2Q8TAZ6 248 aa10.98□□□□□ -0.65
SNX13-205ENST00000471744 PGPA6NDG6 321 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 M0R2Z0 102 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
SNX13-205ENST00000471744 LEPP41159 167 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 ZNF726P1Q15940 193 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 C9orf47Q6ZRZ4 202 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
SNX13-205ENST00000471744 A0A0J9YWU9 116 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 RAB5CP51148 216 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 CD300CQ08708 224 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 SSX7Q7RTT5 188 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 TMEM256Q8N2U0 113 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 C9orf62Q8N4C0 152 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 MUC7Q8TAX7 377 aa10.96□□□□□ -0.65
SNX13-205ENST00000471744 TMED6Q8WW62 240 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms