RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 COL6A5A8TX70 2615 aa6.56□□□□□ -1.36
HDLBP-233ENST00000470710 TRBV6-1A0A0K0K1D8 114 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 DIRC3C9JPN6 131 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 K7EQG2 157 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 M0R3E3 92 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 ID1P41134 155 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 AKR1C3P42330 323 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 CNN1P51911 297 aaKnown RBP6.55□□□□□ -1.36
HDLBP-233ENST00000470710 CEBPGP53567 150 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 GNG5P63218 68 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 PAFAH1B2P68402 229 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 PSG3Q16557 428 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 C12orf54Q6X4T0 127 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 C3orf56Q8N813 242 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 OR2K2Q8NGT1 345 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 SMIM7Q9BQ49 75 aa6.55□□□□□ -1.36
HDLBP-233ENST00000470710 FBLL1A6NHQ2 334 aaKnown RBP6.54□□□□□ -1.36
HDLBP-233ENST00000470710 ZNF727A8MUV8 499 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 C9JCJ5 164 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 K7EQM0 130 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 DNASE2O00115 360 aaPredicted RBP6.54□□□□□ -1.36
HDLBP-233ENST00000470710 HLA-DMBP28068 263 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 RPL35P42766 123 aaKnown RBP6.54□□□□□ -1.36
HDLBP-233ENST00000470710 TAS2R60P59551 318 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 TMEM183BQ1AE95 376 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 CD300EQ496F6 205 aaPredicted RBP6.54□□□□□ -1.36
HDLBP-233ENST00000470710 IGFL4Q6B9Z1 124 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 LCN12Q6JVE5 192 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 RBPMS2Q6ZRY4 209 aaKnown RBP6.54□□□□□ -1.36
HDLBP-233ENST00000470710 GOLT1AQ6ZVE7 132 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 TMEM61Q8N0U2 210 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 TMEM75Q8N9X5 138 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 FMC1Q96HJ9 113 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 C20orf173Q96LM9 149 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
HDLBP-233ENST00000470710 NIPSNAP3BQ9BS92 247 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 DERL1Q9BUN8 251 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
HDLBP-233ENST00000470710 TRBV20OR9-2A0A075B6H5 130 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 RBAKDNA6NC62 111 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 SAP30O75446 220 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 IGLV1-51P01701 117 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 IGLV2-11P01706 119 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 APOC3P02656 99 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 INSL3P51460 131 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 SNRPD3P62318 126 aaKnown RBP6.53□□□□□ -1.36
HDLBP-233ENST00000470710 TMEM241Q24JQ0 296 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 SVBPQ8N300 66 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 GBGT1Q8N5D6 347 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 WFDC9Q8NEX5 89 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 IGF2BP2-AS1Q96M15 143 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 LINC00479Q96M42 142 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 NAT8Q9UHE5 227 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 RPH3ALQ9UNE2 315 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 SELENOKQ9Y6D0 94 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 STAB1Q9NY15 2570 aa6.53□□□□□ -1.36
HDLBP-233ENST00000470710 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 TRAV34A0A0B4J273 112 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 OR4C46A6NHA9 309 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 ZNF705FA8MVS1 300 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-233ENST00000470710 PRAC2D3DTV9 90 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 LTAP01374 205 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 GNG4P50150 75 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 UBE2G1P62253 170 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 PNRC1Q12796 327 aaPredicted RBP6.52□□□□□ -1.37
HDLBP-233ENST00000470710 GUCA2BQ16661 112 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 CENPWQ5EE01 88 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 Q86TA4 180 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 WFDC3Q8IUB2 231 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 ZNF738Q8NE65 137 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 TVP23CQ96ET8 276 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 SMIM12Q96EX1 92 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 MCRIP2Q9BUT9 160 aaKnown RBP6.52□□□□□ -1.37
HDLBP-233ENST00000470710 SDF2L1Q9HCN8 221 aa6.52□□□□□ -1.37
HDLBP-233ENST00000470710 IGKV2-40A0A087WW87 121 aaPredicted RBP6.51□□□□□ -1.37
HDLBP-233ENST00000470710 SNAPINO95295 136 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 IGKV2D-40P01614 121 aaPredicted RBP6.51□□□□□ -1.37
HDLBP-233ENST00000470710 ZNF688P0C7X2 276 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 TFPI2P48307 235 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 FLI1Q01543 452 aaPredicted RBP6.51□□□□□ -1.37
HDLBP-233ENST00000470710 C9orf66Q5T8R8 295 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 C9orf47Q6ZRZ4 202 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 BAGE2Q86Y30 109 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 FAM24BQ8N5W8 94 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 VGLL1Q99990 258 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 PPP1R14DQ9NXH3 145 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 PSG8Q9UQ74 426 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 ZFP30Q9Y2G7 519 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 ZNF256Q9Y2P7 627 aaPredicted RBP6.51□□□□□ -1.37
HDLBP-233ENST00000470710 VWFP04275 2813 aa6.51□□□□□ -1.37
HDLBP-233ENST00000470710 ANK2Q01484 3957 aa6.5□□□□□ -1.37
HDLBP-233ENST00000470710 TRAV8-1A0A0A6YYK1 113 aa6.5□□□□□ -1.37
HDLBP-233ENST00000470710 IZUMO1RA6ND01 250 aa6.5□□□□□ -1.37
HDLBP-233ENST00000470710 B4DEV8 164 aa6.5□□□□□ -1.37
HDLBP-233ENST00000470710 NPIPB6E9PJ23 425 aa6.5□□□□□ -1.37
HDLBP-233ENST00000470710 M0R036 132 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms