RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 MRPS10P82664 201 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 WFDC10BQ8IUB3 73 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 ZNF431Q8TF32 576 aaPredicted RBP12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 C8orf49Q96NF6 230 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 HHLA3Q9XRX5 114 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 A0A087WXM4 84 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 CRYGDP07320 174 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 PLP1P60201 277 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 SELENOTP62341 195 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 SLAQ13239 276 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 LINC00528Q8N1L1 170 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 ST6GAL2Q96JF0 529 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 KLF12Q9Y4X4 402 aa12.78□□□□□ -0.36
NCKIPSD-209ENST00000470006 LINC00854A0A1B0GVQ3 168 aa12.77□□□□□ -0.37
NCKIPSD-209ENST00000470006 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
NCKIPSD-209ENST00000470006 CRYBA4P53673 196 aa12.77□□□□□ -0.37
NCKIPSD-209ENST00000470006 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.37
NCKIPSD-209ENST00000470006 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.37
NCKIPSD-209ENST00000470006 E5RGE8 158 aa12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 MRPS12O15235 138 aaKnown RBP12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 SPINK4O60575 86 aa12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 ATP6V1G2O95670 118 aa12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 SRIP30626 198 aa12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 RRAS2P62070 204 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 PATE2Q6UY27 113 aa12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 BPIFA4PQ86YQ2 179 aa12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 EIF4E3Q8N5X7 224 aaKnown RBP12.76□□□□□ -0.37
NCKIPSD-209ENST00000470006 SLC17A3O00476 420 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 SLC25A6P12236 298 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 ZNF415Q09FC8 603 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 IL18Q14116 193 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 TEPPQ6URK8 271 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 LINC00305Q7Z4B0 112 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 C10orf126Q8N4M7 172 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 PCNPQ8WW12 178 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 ODF3Q96PU9 254 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 MRPL16Q9NX20 251 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
NCKIPSD-209ENST00000470006 TRGV4A0A0C4DH28 118 aa12.74□□□□□ -0.37
NCKIPSD-209ENST00000470006 C7orf71A4D174 169 aa12.74□□□□□ -0.37
NCKIPSD-209ENST00000470006 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-209ENST00000470006 VAMP1P23763 118 aa12.74□□□□□ -0.37
NCKIPSD-209ENST00000470006 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
NCKIPSD-209ENST00000470006 RNASE4P34096 147 aaKnown RBP12.73□□□□□ -0.37
NCKIPSD-209ENST00000470006 TCL1AP56279 114 aa12.73□□□□□ -0.37
NCKIPSD-209ENST00000470006 Q8N814 137 aa12.73□□□□□ -0.37
NCKIPSD-209ENST00000470006 MIXL1Q9H2W2 232 aa12.73□□□□□ -0.37
NCKIPSD-209ENST00000470006 RABL2BQ9UNT1 228 aa12.73□□□□□ -0.37
NCKIPSD-209ENST00000470006 GOSR2O14653 212 aa12.72□□□□□ -0.37
NCKIPSD-209ENST00000470006 HOXB5P09067 269 aa12.72□□□□□ -0.37
NCKIPSD-209ENST00000470006 SLC38A11Q08AI6 406 aa12.72□□□□□ -0.37
NCKIPSD-209ENST00000470006 FHL2Q14192 279 aa12.72□□□□□ -0.37
NCKIPSD-209ENST00000470006 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
NCKIPSD-209ENST00000470006 PSENENQ9NZ42 101 aa12.72□□□□□ -0.37
NCKIPSD-209ENST00000470006 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 K7EQD1 137 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 RGS13O14921 159 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 COX7A2P2O60397 106 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 BTN1A1Q13410 526 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 VGLL1Q99990 258 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 MRPL32Q9BYC8 188 aaKnown RBP12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 NPVFQ9HCQ7 196 aa12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.37
NCKIPSD-209ENST00000470006 CTDSP2O14595 271 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 MPDU1O75352 247 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 C1QBP02746 253 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 GYPEP15421 78 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 CD300CQ08708 224 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 ERCC8Q13216 396 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 TMEM128Q5BJH2 165 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 PXDC1Q5TGL8 231 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 ARPC5LQ9BPX5 153 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 Q9HAA7 133 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 MGAT4CQ9UBM8 478 aa12.7□□□□□ -0.38
NCKIPSD-209ENST00000470006 LRP1Q07954 4544 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 DNAH8Q96JB1 4490 aa12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 TRAV5A0A0B4J249 113 aa12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 DIRAS2Q96HU8 199 aa12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 NAA50Q9GZZ1 169 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 CCDC59Q9P031 241 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
NCKIPSD-209ENST00000470006 H3BQ15 152 aa12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 CTDSPLO15194 276 aa12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 GPX1P07203 203 aa12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 POLR2GP62487 172 aaKnown RBP eCLIP12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 LRTM2Q8N967 370 aa12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 TXNDC17Q9BRA2 123 aa12.68□□□□□ -0.38
NCKIPSD-209ENST00000470006 SSSCA1O60232 199 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 CCNKO75909 580 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 OXTP01178 125 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 METTL15P1P0C7V9 234 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 IGLC2P0DOY2 106 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 OPCMLQ14982 345 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 SAT2Q96F10 170 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-209ENST00000470006 KLLNB2CW77 178 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms