RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 HIST1H2BJP06899 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BOP23527 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BBP33778 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 AKR1D1P51857 326 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BDP58876 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 LYZP61626 148 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BCP62807 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST2H2BEQ16778 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.39□□□□□ -0.27
MRPL28-208ENST00000469744 VN1R17PQ8TDU5 208 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BHQ93079 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BNQ99877 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H2BMQ99879 126 aa13.39□□□□□ -0.27
MRPL28-208ENST00000469744 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 H3BRN7 92 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 ISLRO14498 428 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 HIST1H1EP10412 219 aaKnown RBP13.38□□□□□ -0.27
MRPL28-208ENST00000469744 FRZBQ92765 325 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 SHANK2-AS3Q9BTD1 123 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 C21orf62Q9NYP8 219 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 EPDR1Q9UM22 224 aa13.38□□□□□ -0.27
MRPL28-208ENST00000469744 GNG7O60262 68 aa13.37□□□□□ -0.27
MRPL28-208ENST00000469744 IGLV2-8P01709 118 aa13.37□□□□□ -0.27
MRPL28-208ENST00000469744 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
MRPL28-208ENST00000469744 RHOGP84095 191 aa13.37□□□□□ -0.27
MRPL28-208ENST00000469744 TMEM183BQ1AE95 376 aa13.37□□□□□ -0.27
MRPL28-208ENST00000469744 KLF12Q9Y4X4 402 aa13.37□□□□□ -0.27
MRPL28-208ENST00000469744 S100A7P31151 101 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 NDUFA6P56556 154 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 ACTL10Q5JWF8 245 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 C5orf17Q8NAS9 161 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 RNF125Q96EQ8 232 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 ASCL2Q99929 193 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 OTORQ9NRC9 128 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
MRPL28-208ENST00000469744 NDUFB8O95169 186 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 BRI3O95415 125 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 SYNJ2BPP57105 145 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 ERVFC1-1P60608 527 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 RPL19P84098 196 aaKnown RBP13.36□□□□□ -0.27
MRPL28-208ENST00000469744 PEF1Q9UBV8 284 aaKnown RBP13.36□□□□□ -0.27
MRPL28-208ENST00000469744 V9GYV3 84 aa13.36□□□□□ -0.27
MRPL28-208ENST00000469744 TENM3Q9P273 2699 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 ZNF320A2RRD8 509 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 PGPA6NDG6 321 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 SLC25A5P05141 298 aaKnown RBP13.35□□□□□ -0.27
MRPL28-208ENST00000469744 RANP62826 216 aaKnown RBP13.35□□□□□ -0.27
MRPL28-208ENST00000469744 KLF5Q13887 457 aaPredicted RBP13.35□□□□□ -0.27
MRPL28-208ENST00000469744 BPIFA4PQ86YQ2 179 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 LYPD1Q8N2G4 141 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 ATG101Q9BSB4 218 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 CHRDL1Q9BU40 450 aa13.35□□□□□ -0.27
MRPL28-208ENST00000469744 GAR1Q9NY12 217 aaKnown RBP13.35□□□□□ -0.27
MRPL28-208ENST00000469744 STAB2Q8WWQ8 2551 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 OR2J3O76001 311 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 RPEL1Q2QD12 228 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 Q56UQ5 140 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 COA6Q5JTJ3 125 aaKnown RBP13.34□□□□□ -0.27
MRPL28-208ENST00000469744 BLNKQ8WV28 456 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 ATP6V0BQ99437 205 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 Q9H3A6 140 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 FBXL7Q9UJT9 491 aa13.34□□□□□ -0.27
MRPL28-208ENST00000469744 TRBV9A0A0B4J1U6 114 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 TRBV6-1A0A0K0K1D8 114 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 IL4P05112 153 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 SMIM6P0DI80 62 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 MEOX2P50222 304 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 ATP5G2Q06055 141 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 COX19Q49B96 90 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 BAGE2Q86Y30 109 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 OR9G4Q8NGQ1 327 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 FMC1Q96HJ9 113 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 SMAD5-AS1Q9Y6J3 95 aa13.33□□□□□ -0.28
MRPL28-208ENST00000469744 ZNF98A6NK75 572 aa13.32□□□□□ -0.28
MRPL28-208ENST00000469744 FAM223BA6NKX1 122 aa13.32□□□□□ -0.28
MRPL28-208ENST00000469744 OR5I1Q13606 314 aa13.32□□□□□ -0.28
MRPL28-208ENST00000469744 FAM223AQ8IWN6 122 aa13.32□□□□□ -0.28
MRPL28-208ENST00000469744 ZNF586Q9NXT0 402 aa13.32□□□□□ -0.28
MRPL28-208ENST00000469744 BMPR1BO00238 502 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 MRPS12O15235 138 aaKnown RBP13.31□□□□□ -0.28
MRPL28-208ENST00000469744 IGLV1-51P01701 117 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 IGLC2P0DOY2 106 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 UBE2G1P62253 170 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 C15orf32Q32M92 178 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 IBA57Q5T440 356 aaKnown RBP13.31□□□□□ -0.28
MRPL28-208ENST00000469744 GPR82Q96P67 336 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 S4R3C0 116 aa13.31□□□□□ -0.28
MRPL28-208ENST00000469744 TRBV19A0A075B6N1 114 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 SLC17A3O00476 420 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 IGHV3-23P01764 117 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 TCRAP04437 139 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 PDE6HQ13956 83 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 LEMD1Q68G75 181 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 ZNF502Q8TBZ5 544 aa13.3□□□□□ -0.28
MRPL28-208ENST00000469744 SMIM27A0A1W2PRY6 76 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms