RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 CYP2G1PQ6ZSU1 146 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 THAP8Q8NA92 274 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 NPIPB3Q92617 1050 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 C17orf77Q96MU5 243 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 MGST2Q99735 147 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 ATG101Q9BSB4 218 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 C21orf62Q9NYP8 219 aa8.93□□□□□ -0.98
HDAC6-217ENST00000469223 CLN5O75503 358 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 OR10J1P30954 320 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 FUSP35637 526 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC6-217ENST00000469223 CDC34P49427 236 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-217ENST00000469223 Q56UQ5 140 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 TMEM88Q6PEY1 159 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 TRPT1Q86TN4 253 aaKnown RBP8.92□□□□□ -0.98
HDAC6-217ENST00000469223 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 SFT2D1Q8WV19 159 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 MRPL32Q9BYC8 188 aaKnown RBP8.92□□□□□ -0.98
HDAC6-217ENST00000469223 SMDT1Q9H4I9 107 aa8.92□□□□□ -0.98
HDAC6-217ENST00000469223 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 I3L2K1 104 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 NDUFA4O00483 81 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 NUPL2O15504 423 aaKnown RBP8.91□□□□□ -0.98
HDAC6-217ENST00000469223 COX7A2P2O60397 106 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 ATP6V1G1O75348 118 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 PEA15Q15121 130 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 MIC13Q5XKP0 118 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 FAM24BQ8N5W8 94 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 EIF4E3Q8N5X7 224 aaKnown RBP8.91□□□□□ -0.98
HDAC6-217ENST00000469223 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 FNDC4Q9H6D8 234 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-217ENST00000469223 RPRMQ9NS64 109 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 SMPXQ9UHP9 88 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 SLC45A2Q9UMX9 530 aa8.91□□□□□ -0.98
HDAC6-217ENST00000469223 LRP2P98164 4655 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 IGHV3OR16-13A0A075B7E8 117 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 IGHV3-74A0A0B4J1X5 117 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 MAP1LC3B2A6NCE7 125 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 K7EMT4 169 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 CHEK1O14757 476 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 LINC00869P0C866 280 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 CSNK1G2-AS1Q8NCQ2 148 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 STXBP6Q8NFX7 210 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 LYPD6BQ8NI32 183 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 Q8WTZ3 238 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 PCNPQ8WW12 178 aaKnown RBP8.9□□□□□ -0.98
HDAC6-217ENST00000469223 MBD3L1Q8WWY6 194 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 MAP1LC3BQ9GZQ8 125 aa8.9□□□□□ -0.98
HDAC6-217ENST00000469223 IGHV7-4-1A0A0J9YVY3 117 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 KRBOX1C9JBD0 128 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 K7EIM0 57 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 CXorf1O96002 111 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 PSMB3P49720 205 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 EMP1P54849 157 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 YPEL3P61236 119 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-217ENST00000469223 RELQ04864 619 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-217ENST00000469223 KHDC3LQ587J8 217 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 SLC7A5P1Q8MH63 180 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 EIF5A2Q9GZV4 153 aaKnown RBP8.89□□□□□ -0.99
HDAC6-217ENST00000469223 DNAJC4Q9NNZ3 241 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 MANBALQ9NQG1 85 aa8.89□□□□□ -0.99
HDAC6-217ENST00000469223 IGHV3-21A0A0B4J1V1 117 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 KRTAP29-1A8MX34 341 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-217ENST00000469223 FAM229AH3BQW9 127 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 HYPMO75409 117 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 IGLC1P0CG04 106 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 BTF3P20290 206 aaKnown RBP8.88□□□□□ -0.99
HDAC6-217ENST00000469223 FHITP49789 147 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 MLANAQ16655 118 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 FAM78BQ5VT40 261 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 LCN15Q6UWW0 184 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 PQLC2Q6ZP29 291 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 IQCF2Q8IXL9 164 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 OR51G1Q8NGK1 321 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 SUN5Q8TC36 379 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 NARS2Q96I59 477 aaKnown RBP8.88□□□□□ -0.99
HDAC6-217ENST00000469223 KRTAP1-5Q9BYS1 174 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 SLC25A22Q9H936 323 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 FUT9Q9Y231 359 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 PKHD1L1Q86WI1 4243 aa8.88□□□□□ -0.99
HDAC6-217ENST00000469223 KNCNA6PVL3 124 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 TOMM40O96008 361 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 CTSGP08311 255 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 OR5G3P0C626 314 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 PAFAH1B2P68402 229 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 HAMPP81172 84 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 FAM90A2PQ658T7 463 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 TCF24Q7RTU0 167 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 FAM210AQ96ND0 272 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 TXNDC17Q9BRA2 123 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 TREM1Q9NP99 234 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 TMEM167BQ9NRX6 74 aa8.87□□□□□ -0.99
HDAC6-217ENST00000469223 DNAH8Q96JB1 4490 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
HDAC6-217ENST00000469223 DNASE2O00115 360 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms