RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PHOX2AO14813 284 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 IGHV3-11P01762 117 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 CDX1P47902 265 aaPredicted RBP7.81□□□□□ -1.16
MSH5-213ENST00000468136 COA6Q5JTJ3 125 aaKnown RBP7.81□□□□□ -1.16
MSH5-213ENST00000468136 ZNF418Q8TF45 676 aaPredicted RBP7.81□□□□□ -1.16
MSH5-213ENST00000468136 YAE1D1Q9NRH1 226 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 SMPXQ9UHP9 88 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 M0QZ24 198 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BKO60814 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BJP06899 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 SNRPCP09234 159 aaKnown RBP7.8□□□□□ -1.16
MSH5-213ENST00000468136 TRGC1P0CF51 173 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HOXA5P20719 270 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BOP23527 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BBP33778 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 ID1P41134 155 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BDP58876 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BCP62807 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST2H2BEQ16778 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 SMUG1Q53HV7 270 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.8□□□□□ -1.16
MSH5-213ENST00000468136 FAM162BQ5T6X4 162 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 ZFP82Q8N141 532 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BHQ93079 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 C16orf92Q96LL3 132 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 LINC00477Q96M19 166 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 PRR25Q96S07 402 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BNQ99877 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 HIST1H2BMQ99879 126 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 ASCL2Q99929 193 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
MSH5-213ENST00000468136 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 M0R3E3 92 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 RNASE1P07998 156 aaKnown RBP7.79□□□□□ -1.16
MSH5-213ENST00000468136 SNRPEP62304 92 aaKnown RBP7.79□□□□□ -1.16
MSH5-213ENST00000468136 KRTAP1-1Q07627 177 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 TMEM78Q5T7P6 136 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 HIST2H2BCQ6DN03 193 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 PRR27Q6MZM9 219 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 RBPMS2Q6ZRY4 209 aaKnown RBP7.79□□□□□ -1.16
MSH5-213ENST00000468136 C9orf47Q6ZRZ4 202 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 FRZBQ92765 325 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 RHPN1-AS1Q9BWJ2 59 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 C16orf95Q9H693 158 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 POLQO75417 2590 aa7.79□□□□□ -1.16
MSH5-213ENST00000468136 TRAV8-1A0A0A6YYK1 113 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 DNAJC9-AS1A6NH13 148 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 TRBV12-3P01733 135 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
MSH5-213ENST00000468136 FOSL1P15407 271 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 ZNF138P52744 262 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 TMEM95Q3KNT9 176 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 UNQ9165/PRO28630Q6UXU0 137 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 KLHDC1Q8N7A1 406 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 NHLRC2Q8NBF2 726 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 OR2D3Q8NGH3 330 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 C4orf3Q8WVX3 66 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 BORCS7Q96B45 105 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 NEU1Q99519 415 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 PEMTQ9UBM1 199 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 FBN2P35556 2912 aa7.78□□□□□ -1.16
MSH5-213ENST00000468136 TRAV2A0A0B4J234 112 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 FABP5P3A8MUU1 101 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 HIGD1CA8MV81 97 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 SNURFLB1AK76 121 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 APOHP02749 345 aaPredicted RBP7.77□□□□□ -1.17
MSH5-213ENST00000468136 SRD5A1P18405 259 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 NDUFA6P56556 154 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 HIST1H1AQ02539 215 aaPredicted RBP7.77□□□□□ -1.17
MSH5-213ENST00000468136 RIGQ13278 110 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 DMRTA1Q5VZB9 504 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 OR10J6PQ8NGY7 276 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 ZC2HC1AQ96GY0 325 aa7.77□□□□□ -1.17
MSH5-213ENST00000468136 IGHV3OR16-8A0A075B7F1 116 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 TRAV8-2A0A0B4J237 113 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 FAM181BA6NEQ2 426 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 LINC01619G3V211 115 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 SOCS3O14543 225 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 ZNF207O43670 478 aaKnown RBP7.76□□□□□ -1.17
MSH5-213ENST00000468136 NDUFA7O95182 113 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 S100A2P29034 98 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 HILS1P60008 231 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 PAFAH1B2P68402 229 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 HBBP68871 147 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 Q6ZSV7 163 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 DPF1Q92782 380 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
MSH5-213ENST00000468136 MRPL18Q9H0U6 180 aaKnown RBP7.76□□□□□ -1.17
MSH5-213ENST00000468136 HELZ2Q9BYK8 2649 aaKnown RBP7.75□□□□□ -1.17
MSH5-213ENST00000468136 TACC2O95359 2948 aa7.75□□□□□ -1.17
MSH5-213ENST00000468136 IGKV2-40A0A087WW87 121 aaPredicted RBP7.75□□□□□ -1.17
MSH5-213ENST00000468136 IGHV3-66A0A0C4DH42 116 aa7.75□□□□□ -1.17
MSH5-213ENST00000468136 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
MSH5-213ENST00000468136 TMEM189A5PLL7 270 aa7.75□□□□□ -1.17
MSH5-213ENST00000468136 IGKV2D-40P01614 121 aaPredicted RBP7.75□□□□□ -1.17
MSH5-213ENST00000468136 SNRPD3P62318 126 aaKnown RBP7.75□□□□□ -1.17
MSH5-213ENST00000468136 Q0VG73 95 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms