RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 PRELID1Q9Y255 219 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 SMAD5-AS1Q9Y6J3 95 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 F8P00451 2351 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 HIVEP1P15822 2718 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 OTOGQ6ZRI0 2925 aa4.15□□□□□ -1.75
VPS41-211ENST00000466017 FLNBO75369 2602 aaKnown RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 TRBV19A0A075B6N1 114 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 TRAV25A0A0B4J276 109 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 TRBV6-1A0A0K0K1D8 114 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 SERTM2A0A1B0GWG4 89 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 TMEM213A2RRL7 107 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 PGPA6NDG6 321 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 HELTA6NFD8 242 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 FBLL1A6NHQ2 334 aaKnown RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 H3BQ15 152 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CCL24O00175 119 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CHEK1O14757 476 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 HMGB3O15347 200 aaKnown RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 NDUFB4O95168 129 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CBLN1P23435 193 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 HOXD3P31249 432 aaPredicted RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 GALR1P47211 349 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 TAS2R60P59551 318 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 UBE2L3P68036 154 aaKnown RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 PSG9Q00887 426 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 HAGHQ16775 308 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 OR9G4Q8NGQ1 327 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 RXFP4Q8TDU9 374 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 C17orf77Q96MU5 243 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CITED1Q99966 193 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CITED2Q99967 270 aaPredicted RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 RARRES2Q99969 163 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 SLC50A1Q9BRV3 221 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 RHPN1-AS1Q9BWJ2 59 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 TREM1Q9NP99 234 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 ZNF331Q9NQX6 463 aaPredicted RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 OTORQ9NRC9 128 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 PPP1R14DQ9NXH3 145 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CARHSP1Q9Y2V2 147 aaKnown RBP4.14□□□□□ -1.75
VPS41-211ENST00000466017 LY96Q9Y6Y9 160 aa4.14□□□□□ -1.75
VPS41-211ENST00000466017 CELSR1Q9NYQ6 3014 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 MAP1AP78559 2803 aaPredicted RBP4.13□□□□□ -1.75
VPS41-211ENST00000466017 IGHV3-35A0A0C4DH35 117 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 ZNF320A2RRD8 509 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 C2orf70A6NJV1 201 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 C9JQL5 133 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 C11orf94C9JXX5 98 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
VPS41-211ENST00000466017 CSN3P07498 182 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 NPSP0C0P6 89 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 PYYP10082 97 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 TIRAPP58753 221 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 KRTAP10-3P60369 221 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 SOHLH1Q5JUK2 328 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 SIGLEC15Q6ZMC9 328 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.13□□□□□ -1.75
VPS41-211ENST00000466017 C5orf17Q8NAS9 161 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 KLHL30-AS1Q8NEE0 82 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 OR2K2Q8NGT1 345 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 DLX4Q92988 240 aaPredicted RBP4.13□□□□□ -1.75
VPS41-211ENST00000466017 SMIM12Q96EX1 92 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 OR5B12Q96R08 314 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 C20orf24Q9BUV8 137 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 MLXQ9UH92 298 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 EPDR1Q9UM22 224 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 KLF12Q9Y4X4 402 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 MXRA5Q9NR99 2828 aa4.13□□□□□ -1.75
VPS41-211ENST00000466017 RBAKDNA6NC62 111 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 GGTLC3B5MD39 225 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 C9JCJ5 164 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 F8W036 122 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 M0QZ24 198 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 SOCS3O14543 225 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 OVOL1O14753 267 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 ATP6V1G1O75348 118 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 EIF3GO75821 320 aaKnown RBP eCLIP4.12□□□□□ -1.75
VPS41-211ENST00000466017 SLC25A5P05141 298 aaKnown RBP4.12□□□□□ -1.75
VPS41-211ENST00000466017 OR10J4P0C629 311 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 FOLR2P14207 255 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 ATP5G3P48201 142 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 CMC4P56277 68 aaPredicted RBP4.12□□□□□ -1.75
VPS41-211ENST00000466017 SYNJ2BPP57105 145 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 RANP62826 216 aaKnown RBP4.12□□□□□ -1.75
VPS41-211ENST00000466017 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
VPS41-211ENST00000466017 TMEM183BQ1AE95 376 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 DEFB114Q30KQ6 69 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 CST9LP1Q5W188 147 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 LEMD1Q68G75 181 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 SUMO4Q6EEV6 95 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 ADAMTSL5Q6ZMM2 481 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 C18orf65Q6ZTR6 163 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 WFDC9Q8NEX5 89 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 C2CD4CQ8TF44 421 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 TMEM158Q8WZ71 300 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 Q9H3A6 140 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 AAMDCQ9H7C9 122 aa4.12□□□□□ -1.75
VPS41-211ENST00000466017 YTHDF2Q9Y5A9 579 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms