RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 RPP25LQ8N5L8 163 aaKnown RBP8.46□□□□□ -1.06
CUX1-207ENST00000465461 OR2G3Q8NGZ4 309 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 MUC7Q8TAX7 377 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 PHYHIPLQ96FC7 376 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 PSMG3Q9BT73 122 aaPredicted RBP8.46□□□□□ -1.06
CUX1-207ENST00000465461 X6R8D5 127 aa8.46□□□□□ -1.06
CUX1-207ENST00000465461 A8MTW9 85 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 ZNF253O75346 499 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 PRM2P04554 102 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 RANP62826 216 aaKnown RBP8.45□□□□□ -1.06
CUX1-207ENST00000465461 UBE2L3P68036 154 aaKnown RBP8.45□□□□□ -1.06
CUX1-207ENST00000465461 CD300CQ08708 224 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 ERCC8Q13216 396 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 KHDC3LQ587J8 217 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 BAP18Q8IXM2 172 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
CUX1-207ENST00000465461 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 HMSDA8MTL9 139 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 ZNF705EA8MWA4 302 aaPredicted RBP8.44□□□□□ -1.06
CUX1-207ENST00000465461 J3KRW8 73 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 TAAR5O14804 337 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 CRXO43186 299 aaPredicted RBP8.44□□□□□ -1.06
CUX1-207ENST00000465461 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
CUX1-207ENST00000465461 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 CDC34P49427 236 aaPredicted RBP8.44□□□□□ -1.06
CUX1-207ENST00000465461 TAS2R45P59539 299 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 KIR3DS1Q14943 382 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
CUX1-207ENST00000465461 TMEM41BQ5BJD5 291 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 C1orf158Q8N1D5 194 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 C1QTNF4Q9BXJ3 329 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 PPP1R14DQ9NXH3 145 aa8.44□□□□□ -1.06
CUX1-207ENST00000465461 IGKV2-40A0A087WW87 121 aaPredicted RBP8.43□□□□□ -1.06
CUX1-207ENST00000465461 BOLA2-SMG1P6H3BVE0 249 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 JTBO76095 146 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 IGKV2D-40P01614 121 aaPredicted RBP8.43□□□□□ -1.06
CUX1-207ENST00000465461 ARL14EPLP0DKL9 152 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 CT45A10P0DMU9 189 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 SERF2P84101 59 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 PDE6HQ13956 83 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 ZNF345Q14585 488 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 ZNF726P1Q15940 193 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 TMUB2Q71RG4 321 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 Q8NAQ8 132 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 OR10J6PQ8NGY7 276 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 IL17DQ8TAD2 202 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
CUX1-207ENST00000465461 Q9H3A6 140 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 AAMDCQ9H7C9 122 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
CUX1-207ENST00000465461 A0A0D9SG52 128 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 MBP02144 154 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 PMS2P11Q13670 270 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 LGALSLQ3ZCW2 172 aaPredicted RBP8.42□□□□□ -1.06
CUX1-207ENST00000465461 CASC10Q5T4H9 136 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 ZNF705AQ6ZN79 300 aaPredicted RBP8.42□□□□□ -1.06
CUX1-207ENST00000465461 TCTE3Q8IZS6 198 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 HYLS1Q96M11 299 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 VGLL1Q99990 258 aa8.42□□□□□ -1.06
CUX1-207ENST00000465461 ZNF471Q9BX82 626 aaPredicted RBP8.42□□□□□ -1.06
CUX1-207ENST00000465461 ACTR3CQ9C0K3 210 aaPredicted RBP8.42□□□□□ -1.06
CUX1-207ENST00000465461 KANTRA0A1W2PQU2 76 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 PGPA6NDG6 321 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 C3orf84H3BNL1 204 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 BCL2L11O43521 198 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 STAG3L2P0CL84 134 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 STAG3L3P0CL85 134 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 MIFP14174 115 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 EMP1P54849 157 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 FGF8P55075 233 aaPredicted RBP8.41□□□□□ -1.06
CUX1-207ENST00000465461 NANOS2P60321 138 aaKnown RBP8.41□□□□□ -1.06
CUX1-207ENST00000465461 PQLC2Q6ZP29 291 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 AKAP14Q86UN6 197 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
CUX1-207ENST00000465461 IGF2BP2-AS1Q96M15 143 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 AGPAT4-IT1Q9H0P7 198 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 TMPRSS5Q9H3S3 457 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 GOLT1BQ9Y3E0 138 aa8.41□□□□□ -1.06
CUX1-207ENST00000465461 ZNF705GA8MUZ8 300 aaPredicted RBP8.4□□□□□ -1.06
CUX1-207ENST00000465461 PFDN1O60925 122 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 INSP01308 110 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 GCHFRP30047 84 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 CDKN1BP46527 198 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 FHITP49789 147 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 GNG5P63218 68 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 ZNF767PQ75MW2 155 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 IQCF2Q8IXL9 164 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 TMEM208Q9BTX3 173 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 CELA1Q9UNI1 258 aa8.4□□□□□ -1.06
CUX1-207ENST00000465461 C1QBP02746 253 aa8.39□□□□□ -1.07
CUX1-207ENST00000465461 AMBPP02760 352 aa8.39□□□□□ -1.07
CUX1-207ENST00000465461 HTN1P15515 57 aa8.39□□□□□ -1.07
CUX1-207ENST00000465461 GFI1BQ5VTD9 330 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms