RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 THEM6Q8WUY1 208 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 CLEC2BQ92478 149 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 PLEKHB2Q96CS7 222 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 LINC00052Q96N35 136 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 CCDC115Q96NT0 180 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 LIMD2Q9BT23 127 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 LRTM1Q9HBL6 345 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 TAF9BQ9HBM6 251 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 NDUFAF1Q9Y375 327 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 MED31Q9Y3C7 131 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 CHCHD2Q9Y6H1 151 aaPredicted RBP0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 NUMA1Q14980 2115 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 ZFHX2Q9C0A1 2572 aaPredicted RBP0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 HEATR5BQ9P2D3 2071 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 KIF1BO60333 1816 aa0.41□□□□□ -2.34
NDUFA4-202ENST00000463308 ARFGEF3Q5TH69 2177 aa0.4□□□□□ -2.34
NDUFA4-202ENST00000463308 TECPR2O15040 1411 aa0.4□□□□□ -2.34
NDUFA4-202ENST00000463308 EML6Q6ZMW3 1958 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 DOCK4Q8N1I0 1966 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 TRAV17A0A0B4J275 112 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 ARL5CA6NH57 179 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 JMJD7-PLA2G4BH0Y9G9 81 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 CDC42EP2O14613 210 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 EDF1O60869 148 aaKnown RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 FAM107AO95990 144 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 IGLV1-51P01701 117 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 TRACP01848 142 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 CD14P08571 375 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 PAEPP09466 180 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 SLC25A4P12235 298 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 COX7CP15954 63 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 CRYGSP22914 178 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 SDC4P31431 198 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 CKS2P33552 79 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 GTF2A1P52655 376 aaPredicted RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 FXYD4P59646 89 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 MAXP61244 160 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 PCBD1P61457 104 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 SNRPD3P62318 126 aaKnown RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 BLCAPP62952 87 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 QRFPP83859 136 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 PRB3Q04118 309 aaPredicted RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 OCIAD2Q56VL3 154 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 TMEM78Q5T7P6 136 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 HAGHLQ6PII5 290 aaPredicted RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 CASC2Q6XLA1 102 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 FOXI2Q6ZQN5 318 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 ARPINQ7Z6K5 226 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 PRR15Q8IV56 129 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 TMEM229BQ8NBD8 167 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 OR9Q1Q8NGQ5 310 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 SKA2Q8WVK7 121 aaPredicted RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 AIF1LQ9BQI0 150 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 RNF122Q9H9V4 155 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 BOKQ9UMX3 212 aaPredicted RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 HSPB11Q9Y547 144 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 EIF3AQ14152 1382 aaKnown RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 SCN3AQ9NY46 2000 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 MED12LQ86YW9 2145 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 LAMB4A4D0S4 1761 aa0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 N4BP2Q86UW6 1770 aaPredicted RBP0.4□□□□□ -2.35
NDUFA4-202ENST00000463308 OBSL1O75147 1896 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 MYH10P35580 1976 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 YTHDC2Q9H6S0 1430 aaKnown RBP0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 SMARCA4P51532 1647 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 ARHGEF28Q8N1W1 1705 aaKnown RBP0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 CEP192Q8TEP8 1941 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 IGHV1-24A0A0C4DH33 117 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 LOC107984640A0A0U1RRK4 108 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 LOC107986453A0A1B0GWG9 222 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 A0A1W2PRS3 328 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 J3KT08 172 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 DEGS1O15121 323 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 NUPR1O60356 82 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 SULT1C4O75897 302 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 IGKCP01834 107 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 TCRAP04437 139 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 RPS3P23396 243 aaKnown RBP eCLIP0.39□□□□□ -2.359e-10■■■■■ 52.1
NDUFA4-202ENST00000463308 KDELR1P24390 212 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 POLR2HP52434 150 aaKnown RBP0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 EFNA4P52798 201 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 B2MP61769 119 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 LSM3P62310 102 aaKnown RBP0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 PSPHP78330 225 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 TFAMQ00059 246 aaKnown RBP0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 SPATA45Q537H7 98 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 HSD17B12Q53GQ0 312 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 TMEM244Q5VVB8 128 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 GLIPR1L1Q6UWM5 242 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 ZCCHC23Q6ZST2 131 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 ZNF833PQ6ZTB9 187 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 TAC4Q86UU9 113 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 OR8I2Q8N0Y5 310 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 OR5AS1Q8N127 324 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 OR51A4Q8NGJ6 313 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 PSMF1Q92530 271 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 ANP32BQ92688 251 aaKnown RBP0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 AMELYQ99218 206 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 NABP2Q9BQ15 211 aa0.39□□□□□ -2.35
NDUFA4-202ENST00000463308 SMIM7Q9BQ49 75 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms