RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 ATP5G1P05496 136 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 CDKN1BP46527 198 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 ATP5G3P48201 142 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 SLC38A11Q08AI6 406 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 RAB31Q13636 194 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 ZNF846Q147U1 533 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 BAK1Q16611 211 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 ZNF493Q6ZR52 646 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 BPIFA4PQ86YQ2 179 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 MITD1Q8WV92 249 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 SLC50A1Q9BRV3 221 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 GSKIPQ9P0R6 139 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
HDAC9-220ENST00000461409 TIMM8BQ9Y5J9 83 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-220ENST00000461409 LINC00854A0A1B0GVQ3 168 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 PLAC8L1A1L4L8 177 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 CBY3A6NI87 242 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 H7BYZ3 331 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 L7N2F9 121 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 AGPAT2O15120 278 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 CCNKO75909 580 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 NUDT3O95989 172 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 PRM2P04554 102 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 HTN1P15515 57 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 AZU1P20160 251 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 CCL18P55774 89 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 VAMP2P63027 116 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 PATE2Q6UY27 113 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 LINC00305Q7Z4B0 112 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 ZBTB8BQ8NAP8 495 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-220ENST00000461409 OR10J6PQ8NGY7 276 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 C20orf144Q9BQM9 153 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 ZNF331Q9NQX6 463 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-220ENST00000461409 RCL1Q9Y2P8 373 aaKnown RBP6.11□□□□□ -1.43
HDAC9-220ENST00000461409 PXMP4Q9Y6I8 212 aa6.11□□□□□ -1.43
HDAC9-220ENST00000461409 C7orf66A4D0T2 115 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 MRPS12O15235 138 aaKnown RBP6.1□□□□□ -1.43
HDAC9-220ENST00000461409 MBPP02686 304 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-220ENST00000461409 IL7P13232 177 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 BTCP35070 178 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 ICAM4Q14773 271 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 GUK1Q16774 197 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 C10orf113Q5VZT2 155 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 RNASE8Q8TDE3 154 aaKnown RBP6.1□□□□□ -1.43
HDAC9-220ENST00000461409 TMEM263Q8WUH6 116 aaKnown RBP6.1□□□□□ -1.43
HDAC9-220ENST00000461409 C20orf85Q9H1P6 137 aa6.1□□□□□ -1.43
HDAC9-220ENST00000461409 PKD1P98161 4303 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 CAMLGP49069 296 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 CAV2P51636 162 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 CLINT1Q14677 625 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 FCN2Q15485 313 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 Q6ZRG5 221 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 CCDC28AQ8IWP9 274 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 ZNRF2Q8NHG8 242 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 PFDN5Q99471 154 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 SDHCQ99643 169 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-220ENST00000461409 MGST2Q99735 147 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 DNAJC4Q9NNZ3 241 aa6.09□□□□□ -1.43
HDAC9-220ENST00000461409 NOP10Q9NPE3 64 aaKnown RBP6.09□□□□□ -1.43
HDAC9-220ENST00000461409 NBDYA0A0U1RRE5 68 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 FAM25EA8MYX2 175 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 IGLC2P0DOY2 106 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 PVALBP20472 110 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-220ENST00000461409 M6PRP20645 277 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 LEPP41159 167 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 BCAP31P51572 246 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 ARL16Q0P5N6 197 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 OPCMLQ14982 345 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 GFI1BQ5VTD9 330 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 C6orf223Q8N319 242 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 C12orf45Q8N5I9 185 aaPredicted RBP6.08□□□□□ -1.44
HDAC9-220ENST00000461409 OR1L4Q8NGR5 311 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 TMEM37Q8WXS4 190 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 ZNF503Q96F45 646 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 ODF3Q96PU9 254 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 UQCC1Q9NVA1 299 aa6.08□□□□□ -1.44
HDAC9-220ENST00000461409 LSM5Q9Y4Y9 91 aaKnown RBP6.08□□□□□ -1.44
HDAC9-220ENST00000461409 C5orf51A6NDU8 294 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 SNURFLB1AK76 121 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 H3BQ15 152 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 SLC17A3O00476 420 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 CCSO14618 274 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 LYRM1O43325 122 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 ZNF253O75346 499 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 CST7O76096 145 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 RLN2P04090 185 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 SNRPCP09234 159 aaKnown RBP6.07□□□□□ -1.44
HDAC9-220ENST00000461409 HBG1P69891 147 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 HBG2P69892 147 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 TTC32Q5I0X7 151 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 NRARPQ7Z6K4 114 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 STX12Q86Y82 276 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 ZNF431Q8TF32 576 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-220ENST00000461409 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
HDAC9-220ENST00000461409 MRPL53Q96EL3 112 aaKnown RBP6.07□□□□□ -1.44
HDAC9-220ENST00000461409 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 NUDT15Q9NV35 164 aa6.07□□□□□ -1.44
HDAC9-220ENST00000461409 WDR83OSQ9Y284 106 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms