RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 A0A1W2PPI3 338 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 NDUFA4O00483 81 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 ATP6V0E1O15342 81 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 MSMBP08118 114 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 PAX9P55771 341 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 MRPL51Q4U2R6 128 aaKnown RBP7.24□□□□□ -1.25
BRCA1-205ENST00000461221 PNRC2Q9NPJ4 139 aaKnown RBP7.24□□□□□ -1.25
BRCA1-205ENST00000461221 SHISA9B4DS77 424 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 NDUFC2O95298 119 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 BVES-AS1Q5T3Y7 98 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 NCOR1P1Q9H4R4 102 aa7.24□□□□□ -1.25
BRCA1-205ENST00000461221 TRIP12Q14669 1992 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-205ENST00000461221 KLHDC3Q9BQ90 382 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 BPESC1Q9GZL8 116 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 ORMDL1Q9P0S3 153 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 K7EP13 123 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 SIVA1O15304 175 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 SNRNP200O75643 2136 aaKnown RBP7.23□□□□□ -1.25
BRCA1-205ENST00000461221 COL8A2P25067 703 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 TINCRA0A1B0GVN0 87 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 EFNA2O43921 213 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 ACYP1P07311 99 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 FAM231DQ6ZW35 169 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 VWCEQ96DN2 955 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 PYGO2Q9BRQ0 406 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 CRYGCP07315 174 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 CD59P13987 128 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 ETDBQ3ZM63 59 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 LYPD2Q6UXB3 125 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 C20orf78Q9BR46 151 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 F8VRH5 84 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 FUSP35637 526 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-205ENST00000461221 CRYBA4P53673 196 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 C8orf86Q6ZUL3 223 aa7.23□□□□□ -1.25
BRCA1-205ENST00000461221 DOCK5Q9H7D0 1870 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 TEX48A0A1B0GUV7 120 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 J3QQQ9 107 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 ANXA2RQ3ZCQ2 193 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 LINC00479Q96M42 142 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 PIKFYVEQ9Y2I7 2098 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 RP1P56715 2156 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 IGHV1-69DA0A0B4J2H0 117 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 IGHV1-69P01742 117 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 ANGP03950 147 aaKnown RBP7.22□□□□□ -1.25
BRCA1-205ENST00000461221 CLPSL1A2RUU4 121 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 IGLC2P0DOY2 106 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 IGLC3P0DOY3 106 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 COL11A1P12107 1806 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-205ENST00000461221 GATA4P43694 442 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 MDS2Q8NDY4 140 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 H3BQ85 93 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 NDUFS6O75380 124 aaKnown RBP7.22□□□□□ -1.25
BRCA1-205ENST00000461221 QRFPP83859 136 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 CFHR4Q92496 578 aa7.22□□□□□ -1.25
BRCA1-205ENST00000461221 IGHV3-38A0A0C4DH36 116 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 CLPSP04118 112 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 ZNF134P52741 427 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 H3BRN7 92 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 HERV-K104P63124 156 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 RHOHQ15669 191 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 NDUFA4L2Q9NRX3 87 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 TMEM14BQ9NUH8 114 aa7.21□□□□□ -1.25
BRCA1-205ENST00000461221 MLANAQ16655 118 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 C15orf53Q8NAA6 179 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 PRR25Q96S07 402 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 ZMAT4Q9H898 229 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 SMIM27A0A1W2PRY6 76 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 J3QLI3 93 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 NDUFB1O75438 58 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 IGHG2P01859 326 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 IGKV1-16P04430 117 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 MP68P56378 58 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 RUSC1-AS1Q66K80 236 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 COL18A1P39060 1754 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 A0A0G2JRQ6 117 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 MST1P26927 711 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 FOXL2NBQ6ZUU3 175 aa7.21□□□□□ -1.26
BRCA1-205ENST00000461221 ARFGEF1Q9Y6D6 1849 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 TDRD6O60522 2096 aaKnown RBP7.2□□□□□ -1.26
BRCA1-205ENST00000461221 F6UB75 175 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 LINC01545Q5VT33 79 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 IGF2BP2-AS1Q96M15 143 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 MRPL35Q9NZE8 188 aaKnown RBP7.2□□□□□ -1.26
BRCA1-205ENST00000461221 ADAMTSL1Q8N6G6 1762 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 PRSS57Q6UWY2 283 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 K7EMI3 77 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 ZNF833PQ6ZTB9 187 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 Q8TCH9 128 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 SIGLEC8Q9NYZ4 499 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 ETDCA0A1B0GVM5 59 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 RNF223E7ERA6 249 aa7.2□□□□□ -1.26
BRCA1-205ENST00000461221 IGHV2-70DA0A0C4DH43 119 aa7.19□□□□□ -1.26
BRCA1-205ENST00000461221 BAALC-AS2P0C853 105 aa7.19□□□□□ -1.26
BRCA1-205ENST00000461221 SLC25A29Q8N8R3 303 aa7.19□□□□□ -1.26
BRCA1-205ENST00000461221 E7EQL1 145 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms