RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 MORN3Q6PF18 240 aaPredicted RBP8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 C5orf17Q8NAS9 161 aa8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 RPUSD4Q96CM3 377 aaKnown RBP8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 PRR25Q96S07 402 aa8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 Q9H3A6 140 aa8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 SELENOKQ9Y6D0 94 aa8.22□□□□□ -1.09
SMNDC1-203ENST00000460483 LOC102724200A0A096LPH7 203 aaPredicted RBP8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 PGPA6NDG6 321 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 AMBPP02760 352 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 TSPOP30536 169 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 KRTAP10-11P60412 298 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 ZNF726P1Q15940 193 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 ODF3L2Q3SX64 289 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 CST9LP1Q5W188 147 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 HIST1H2BAQ96A08 127 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 CLUHP3Q96NS8 147 aa8.21□□□□□ -1.1
SMNDC1-203ENST00000460483 KIR2DL5BA0A0G2JN68 375 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 KIR2DL5BA0A0G2JPC4 375 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 RBAKDNA6NC62 111 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 UBE2CO00762 179 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 SLC25A5P05141 298 aaKnown RBP8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 HLA-DRB4P13762 266 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 FGF8P55075 233 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 SUMO1P63165 101 aaKnown RBP8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 ACTL10Q5JWF8 245 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 KIR2DL5AQ8N109 375 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 KIR2DL5BQ8NHK3 375 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 ZNF503Q96F45 646 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 LINC00477Q96M19 166 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 C17orf77Q96MU5 243 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 SAV1Q9H4B6 383 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 SRD5A3Q9H8P0 318 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 AURKAIP1Q9NWT8 199 aaPredicted RBP8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 HLA-DRB4X5D2U9 266 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 ANK2Q01484 3957 aa8.2□□□□□ -1.1
SMNDC1-203ENST00000460483 TRAV8-2A0A0B4J237 113 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 H3BTX0 84 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 PDE6DO43924 150 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 NDUFB4O95168 129 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 S100A9P06702 114 aaKnown RBP8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 SNRPCP09234 159 aaKnown RBP8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 IGHV4-30-4P0DP06 118 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 APRG1Q8IVJ8 170 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 Q8N1Y9 231 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 OR8A1Q8NGG7 326 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 VAX2Q9UIW0 290 aa8.19□□□□□ -1.1
SMNDC1-203ENST00000460483 TRBV7-9A0A0J9YWB2 115 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 A0A0J9YX75 114 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 SLC17A3O00476 420 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 HIST1H1AQ02539 215 aaPredicted RBP8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 EXOC3-AS1Q8N2X6 119 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 ODF3Q96PU9 254 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 ATG101Q9BSB4 218 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 SMDT1Q9H4I9 107 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 EPDR1Q9UM22 224 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
SMNDC1-203ENST00000460483 A0A1B0GV50 99 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 C11orf94C9JXX5 98 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 H3BMM0 161 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 PAGE4O60829 102 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 NDUFS6O75380 124 aaKnown RBP8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 NMBP08949 121 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 LEPP41159 167 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 UBE2G2P60604 165 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 DEFA6Q01524 100 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 SAPCD1Q5SSQ6 148 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 FAM24BQ8N5W8 94 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 CYB561D1Q8N8Q1 229 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 LYPD6BQ8NI32 183 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 EIF5A2Q9GZV4 153 aaKnown RBP8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 TMPRSS5Q9H3S3 457 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 C19orf73Q9NVV2 129 aa8.17□□□□□ -1.1
SMNDC1-203ENST00000460483 DIRC3C9JPN6 131 aa8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 EIF3GO75821 320 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 TCRAP04437 139 aa8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 BCL2P10415 239 aa8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 UBE2G1P62253 170 aa8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 MEF2BQ02080 365 aaPredicted RBP8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 C9orf47Q6ZRZ4 202 aa8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 TRPT1Q86TN4 253 aaKnown RBP8.16□□□□□ -1.1
SMNDC1-203ENST00000460483 VWFP04275 2813 aa8.15□□□□□ -1.1
SMNDC1-203ENST00000460483 RBFOX3A6NFN3 312 aa8.15□□□□□ -1.1
SMNDC1-203ENST00000460483 KNCNA6PVL3 124 aa8.15□□□□□ -1.1
SMNDC1-203ENST00000460483 NPIPB6E9PJ23 425 aa8.15□□□□□ -1.1
SMNDC1-203ENST00000460483 M0R3E3 92 aa8.15□□□□□ -1.1
SMNDC1-203ENST00000460483 ZNF138P52744 262 aa8.15□□□□□ -1.1
SMNDC1-203ENST00000460483 PEA15Q15121 130 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms